RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 IL5P05113 134 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 SLC6A9P48067 706 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 RTP5Q14D33 572 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 RNPS1Q15287 305 aaKnown RBP13.43□□□□□ -0.26
SF3B4-201ENST00000271628 TMEM255AQ5JRV8 349 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 IGFL2Q6UWQ7 119 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 NLRC3Q7RTR2 1065 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 CDH26Q8IXH8 852 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 SLC22A24Q8N4F4 322 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 GCDHQ92947 438 aaPredicted RBP13.43□□□□□ -0.26
SF3B4-201ENST00000271628 BEX1Q9HBH7 125 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 GPN1Q9HCN4 374 aaPredicted RBP13.43□□□□□ -0.26
SF3B4-201ENST00000271628 ZNF319Q9P2F9 582 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 TMEM272A0A1B0GTI8 110 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 GGT3PA6NGU5 568 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 SNRPGP15A8MWD9 76 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 M0R135 149 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 ICMTO60725 284 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 FARS2O95363 451 aaKnown RBP13.43□□□□□ -0.26
SF3B4-201ENST00000271628 IGLV3-1P01715 115 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 FAUP35544 74 aaKnown RBP13.43□□□□□ -0.26
SF3B4-201ENST00000271628 CLLU1Q5K131 121 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 UXS1Q8NBZ7 420 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 FDCSPQ8NFU4 85 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 ZNF799Q96GE5 643 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 BCO1Q9HAY6 547 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 CGGBP1Q9UFW8 167 aaPredicted RBP13.43□□□□□ -0.26
SF3B4-201ENST00000271628 UBQLN2Q9UHD9 624 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 TIMM10BQ9Y5J6 103 aa13.43□□□□□ -0.26
SF3B4-201ENST00000271628 A0A0A6YYH2 397 aa13.42□□□□□ -0.26
SF3B4-201ENST00000271628 TRGV5A0A0B4J1U4 118 aa13.42□□□□□ -0.26
SF3B4-201ENST00000271628 A6NJ64 397 aa13.42□□□□□ -0.26
SF3B4-201ENST00000271628 G3V3Q6 166 aa13.42□□□□□ -0.26
SF3B4-201ENST00000271628 ARPC1BO15143 372 aaKnown RBP13.42□□□□□ -0.26
SF3B4-201ENST00000271628 SHOXO15266 292 aa13.42□□□□□ -0.26
SF3B4-201ENST00000271628 MTRF1O75570 445 aaKnown RBP13.42□□□□□ -0.26
SF3B4-201ENST00000271628 SRSF6Q13247 344 aaKnown RBP13.42□□□□□ -0.26
SF3B4-201ENST00000271628 GRK1Q15835 563 aa13.42□□□□□ -0.26
SF3B4-201ENST00000271628 RSPO1Q2MKA7 263 aaPredicted RBP13.42□□□□□ -0.26
SF3B4-201ENST00000271628 DRAM2Q6UX65 266 aa13.42□□□□□ -0.26
SF3B4-201ENST00000271628 Q6ZTK2 550 aa13.42□□□□□ -0.26
SF3B4-201ENST00000271628 SLC16A14Q7RTX9 510 aa13.42□□□□□ -0.26
SF3B4-201ENST00000271628 ADGRE4PQ86SQ3 457 aa13.42□□□□□ -0.26
SF3B4-201ENST00000271628 OR52H1Q8NGJ2 320 aa13.42□□□□□ -0.26
SF3B4-201ENST00000271628 FNDC9Q8TBE3 224 aa13.42□□□□□ -0.26
SF3B4-201ENST00000271628 FAM71F1Q96KD3 344 aaPredicted RBP13.42□□□□□ -0.26
SF3B4-201ENST00000271628 EXO5Q9H790 373 aa13.42□□□□□ -0.26
SF3B4-201ENST00000271628 ZDHHC11Q9H8X9 412 aa13.42□□□□□ -0.26
SF3B4-201ENST00000271628 TAS2R8Q9NYW2 309 aa13.42□□□□□ -0.26
SF3B4-201ENST00000271628 ZNF891A8MT65 544 aaPredicted RBP13.41□□□□□ -0.26
SF3B4-201ENST00000271628 CREBL2O60519 120 aaPredicted RBP13.41□□□□□ -0.26
SF3B4-201ENST00000271628 NDUFB6O95139 128 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 ITGB2P05107 769 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 GIPP09681 153 aaPredicted RBP13.41□□□□□ -0.26
SF3B4-201ENST00000271628 TMIGD3P0DMS9 266 aaPredicted RBP13.41□□□□□ -0.26
SF3B4-201ENST00000271628 GABRA1P14867 456 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 B4GALT1P15291 398 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 TSPO2Q5TGU0 170 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 TUSC5Q8IXB3 177 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 OR52N4Q8NGI2 321 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 OR14K1Q8NGZ2 314 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 C10orf35Q96D05 121 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 DPCDQ9BVM2 203 aaPredicted RBP13.41□□□□□ -0.26
SF3B4-201ENST00000271628 DEFB127Q9H1M4 99 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 ATG5Q9H1Y0 275 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 DLL3Q9NYJ7 618 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 RPL36A-HNRNPH2H7BZ11 118 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 SYNGR3O43761 229 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 RBBP9O75884 186 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 RAB6AP20340 208 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 EFNB2P52799 333 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 DHODHQ02127 395 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 PLA2G7Q13093 441 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 EXOSC2Q13868 293 aaKnown RBP13.41□□□□□ -0.26
SF3B4-201ENST00000271628 GFOD2Q3B7J2 385 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 LINC00303Q3SY05 128 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 NAA40Q86UY6 237 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 MCEMP1Q8IX19 187 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 FTMTQ8N4E7 242 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 OR13C9Q8NGT0 318 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 OR1F12Q8NHA8 337 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 OR10A2Q9H208 303 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 CNTD2Q9H8S5 307 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 MAB21L2Q9Y586 359 aa13.41□□□□□ -0.26
SF3B4-201ENST00000271628 CIB4A0PJX0 185 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 H7C417 338 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 LDLRAD4O15165 306 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 DHRS3O75911 302 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 MPC2O95563 127 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 ALDOBP05062 364 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 ABOP16442 354 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 ZNF32P17041 273 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 M6PRP20645 277 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 CRYGSP22914 178 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 ZNF93P35789 620 aaPredicted RBP13.4□□□□□ -0.26
SF3B4-201ENST00000271628 RAD52P43351 418 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 RAB14P61106 215 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 RAP2BP61225 183 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 ZNF626Q68DY1 528 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 Q6ZSR3 168 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms