RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 FIP1L1Q6UN15 594 aaKnown RBP14.53□□□□□ -0.08
CTCF-201ENST00000264010 LRP11Q86VZ4 500 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 CATSPERDQ86XM0 798 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 ZNF687Q8N1G0 1237 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 BPIFB2Q8N4F0 458 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 DVL3Q92997 716 aaPredicted RBP14.53□□□□□ -0.08
CTCF-201ENST00000264010 RASL10BQ96S79 203 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 VRK1Q99986 396 aaPredicted RBP14.53□□□□□ -0.08
CTCF-201ENST00000264010 ZCCHC4Q9H5U6 513 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 MOB1AQ9H8S9 216 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 TRBV5-7A0A0A0MS05 114 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 AQP8O94778 261 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 ZNF28P17035 718 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 HOXA1P49639 335 aaPredicted RBP14.53□□□□□ -0.08
CTCF-201ENST00000264010 VAMP2P63027 116 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 TRA2AQ13595 282 aaKnown RBP eCLIP14.53□□□□□ -0.08
CTCF-201ENST00000264010 LGALSLQ3ZCW2 172 aaPredicted RBP14.53□□□□□ -0.08
CTCF-201ENST00000264010 HIST2H3AQ71DI3 136 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 FAM57BQ71RH2 274 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 OR51S1Q8NGJ8 323 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 OR10D4PQ8NGN7 298 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 ISOC2Q96AB3 205 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 PBOV1Q9GZY1 135 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 SMCO4Q9NRQ5 59 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 MED6O75586 246 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 ABHD16AO95870 558 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 CRYBA1P05813 215 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 EIF5AP63241 154 aaKnown RBP14.53□□□□□ -0.08
CTCF-201ENST00000264010 PMS2CLQ68D20 193 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 COX15Q7KZN9 410 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 NOXO1Q8NFA2 376 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 SLC26A10Q8NG04 563 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 ZBTB8AQ96BR9 441 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 VPS25Q9BRG1 176 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 PRRG4Q9BZD6 226 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 GPR160Q9UJ42 338 aa14.53□□□□□ -0.08
CTCF-201ENST00000264010 GDF2Q9UK05 429 aaPredicted RBP14.53□□□□□ -0.08
CTCF-201ENST00000264010 SOX15O60248 233 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 MFGE8Q08431 387 aaPredicted RBP14.52□□□□□ -0.08
CTCF-201ENST00000264010 SNTB1Q13884 538 aaKnown RBP14.52□□□□□ -0.08
CTCF-201ENST00000264010 DCAF12Q5T6F0 453 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 APCDD1LQ8NCL9 501 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 OR4C16Q8NGL9 310 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 ZMAT3Q9HA38 289 aaKnown RBP14.52□□□□□ -0.08
CTCF-201ENST00000264010 CCDC163A0A0D9SF12 145 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 A0A1W2PQM1 296 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 PRR32B1ATL7 298 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 CXADRP78310 365 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 SSBP1Q04837 148 aaKnown RBP14.52□□□□□ -0.08
CTCF-201ENST00000264010 PMPCAQ10713 525 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 ZNF441Q8N8Z8 693 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 OR2I1PQ8NGU4 316 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 SAP25Q8TEE9 199 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 SCGB3A2Q96PL1 93 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 PRRT1Q99946 306 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 ULBP2Q9BZM5 246 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 PADI1Q9ULC6 663 aa14.52□□□□□ -0.08
CTCF-201ENST00000264010 RTTNQ86VV8 2226 aa14.52□□□□□ -0.09
CTCF-201ENST00000264010 MEIKINA0A087WXM9 373 aa14.52□□□□□ -0.09
CTCF-201ENST00000264010 SNRPGP15A8MWD9 76 aa14.52□□□□□ -0.09
CTCF-201ENST00000264010 NDUFB6O95139 128 aa14.52□□□□□ -0.09
CTCF-201ENST00000264010 ADRA2CP18825 462 aa14.52□□□□□ -0.09
CTCF-201ENST00000264010 IL11P20809 199 aa14.52□□□□□ -0.09
CTCF-201ENST00000264010 FDX2Q6P4F2 183 aa14.52□□□□□ -0.09
CTCF-201ENST00000264010 Q6ZTK2 550 aa14.52□□□□□ -0.09
CTCF-201ENST00000264010 ASB5Q8WWX0 329 aa14.52□□□□□ -0.09
CTCF-201ENST00000264010 SPTSSAQ969W0 71 aa14.52□□□□□ -0.09
CTCF-201ENST00000264010 PARPBPQ9NWS1 579 aa14.52□□□□□ -0.09
CTCF-201ENST00000264010 SEMA5BQ9P283 1151 aa14.52□□□□□ -0.09
CTCF-201ENST00000264010 KCNIP3Q9Y2W7 256 aa14.52□□□□□ -0.09
CTCF-201ENST00000264010 A0A0A6YYH2 397 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 TMEM82A0PJX8 343 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 LINC00862A6NCI5 91 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 A6NJ64 397 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 VAMP5O95183 116 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 SLC2A1P11166 492 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 ZNF93P35789 620 aaPredicted RBP14.51□□□□□ -0.09
CTCF-201ENST00000264010 TNK1Q13470 666 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 ZNF684Q5T5D7 378 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 CD163Q86VB7 1156 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 GABRG1Q8N1C3 465 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 SLAMF9Q96A28 289 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 KLHDC3Q9BQ90 382 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 SLC25A21Q9BQT8 299 aaPredicted RBP14.51□□□□□ -0.09
CTCF-201ENST00000264010 TOLLIPQ9H0E2 274 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 LDAHQ9H6V9 325 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 ZNF275Q9NSD4 429 aaPredicted RBP14.51□□□□□ -0.09
CTCF-201ENST00000264010 HEATR5AQ86XA9 2040 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 TIAF1O95411 115 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 IL5P05113 134 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 CAMLGP49069 296 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 GRB2P62993 217 aaKnown RBP14.51□□□□□ -0.09
CTCF-201ENST00000264010 GUCA2AQ02747 115 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 TRAPPC6BQ86SZ2 158 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 GPR137CQ8N3F9 429 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 STPG2Q8N412 459 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 OR51E1Q8TCB6 317 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 PLEK2Q9NYT0 353 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 KLHL13Q9P2N7 655 aa14.51□□□□□ -0.09
CTCF-201ENST00000264010 TMEM272A0A1B0GTI8 110 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms