RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 MICU1Q9BPX6 476 aa10.18□□□□□ -0.78
TRAF4-202ENST00000262396 PAPOLGQ9BWT3 736 aaKnown RBP10.18□□□□□ -0.78
TRAF4-202ENST00000262396 OR10A2Q9H208 303 aa10.18□□□□□ -0.78
TRAF4-202ENST00000262396 TOR3AQ9H497 397 aa10.18□□□□□ -0.78
TRAF4-202ENST00000262396 PNRC2Q9NPJ4 139 aaKnown RBP10.18□□□□□ -0.78
TRAF4-202ENST00000262396 ACOXLQ9NUZ1 547 aa10.18□□□□□ -0.78
TRAF4-202ENST00000262396 DNAJC27Q9NZQ0 273 aa10.18□□□□□ -0.78
TRAF4-202ENST00000262396 DNAJB11Q9UBS4 358 aa10.18□□□□□ -0.78
TRAF4-202ENST00000262396 PRPF19Q9UMS4 504 aaKnown RBP10.18□□□□□ -0.78
TRAF4-202ENST00000262396 COMMD3-BMI1R4GMX3 469 aa10.18□□□□□ -0.78
TRAF4-202ENST00000262396 TENM1Q9UKZ4 2725 aa10.18□□□□□ -0.78
TRAF4-202ENST00000262396 M0QZ24 198 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 GNGT2O14610 69 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 DVL1O14640 695 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 NDUFB3O43676 98 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 SOX14O95416 240 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 GASTP01350 101 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 SEMG1P04279 462 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 H2BFMP0C1H6 154 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 PAICSP22234 425 aaKnown RBP10.17□□□□□ -0.78
TRAF4-202ENST00000262396 EEF1B2P24534 225 aaKnown RBP10.17□□□□□ -0.78
TRAF4-202ENST00000262396 POU1F1P28069 291 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 PSMB10P40306 273 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 GMFBP60983 142 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 DEFA6Q01524 100 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 CRMP1Q14194 572 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 SPATS1Q496A3 300 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 FAM98BQ52LJ0 330 aaKnown RBP10.17□□□□□ -0.78
TRAF4-202ENST00000262396 OLFML2AQ68BL7 652 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 LYPD4Q6UWN0 246 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 Q6YL49 198 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 ZNF841Q6ZN19 808 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 FAM57BQ71RH2 274 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 TMEM86BQ8N661 226 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 LRRC29Q8WV35 223 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 H1FXQ92522 213 aaKnown RBP10.17□□□□□ -0.78
TRAF4-202ENST00000262396 REEP6Q96HR9 211 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 INTS14Q96SY0 518 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 DPAGT1Q9H3H5 408 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 CNTD2Q9H8S5 307 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 CTSZQ9UBR2 303 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 ARL2BPQ9Y2Y0 163 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 SAMHD1Q9Y3Z3 626 aaKnown RBP10.17□□□□□ -0.78
TRAF4-202ENST00000262396 LYVE1Q9Y5Y7 322 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 POMT1Q9Y6A1 747 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 U3KQV3 271 aa10.17□□□□□ -0.78
TRAF4-202ENST00000262396 IGHV1-69DA0A0B4J2H0 117 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 A0A1B0GWJ7 208 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 NKX6-3A6NJ46 265 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 TIMM23O14925 209 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 TIPRLO75663 272 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 PAHP00439 452 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 IGHV1-69P01742 117 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 MELTFP08582 738 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 SPI1P17947 270 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 GNGT1P63211 74 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 HOXA4Q00056 320 aaPredicted RBP10.16□□□□□ -0.78
TRAF4-202ENST00000262396 PPP1R8Q12972 351 aaKnown RBP10.16□□□□□ -0.78
TRAF4-202ENST00000262396 IKZF1Q13422 519 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 MIDNQ504T8 468 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 LRRC10Q5BKY1 277 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 SHFQ7M4L6 423 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 OR52H1Q8NGJ2 320 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 LRTOMTQ8WZ04 291 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 CCL13Q99616 98 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 CHIAQ9BZP6 476 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 OR51V1Q9H2C8 321 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 ARMC1Q9NVT9 282 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 IL20Q9NYY1 176 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 CD300AQ9UGN4 299 aa10.16□□□□□ -0.78
TRAF4-202ENST00000262396 CENPVL3A0A0U1RRI6 287 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 DHRS12A0PJE2 317 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 CLPSL1A2RUU4 121 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 TNFRSF13BO14836 293 aaPredicted RBP10.15□□□□□ -0.78
TRAF4-202ENST00000262396 KCNAB3O43448 404 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 MUC1P15941 1255 aaPredicted RBP10.15□□□□□ -0.78
TRAF4-202ENST00000262396 GSTT1P30711 240 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 SLC25A1P53007 311 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 IL5RAQ01344 420 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 SLC16A9Q7RTY1 509 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 DHFR2Q86XF0 187 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 FAM90A1Q86YD7 464 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 TIGD4Q8IY51 512 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 GCSAMQ8N6F7 178 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 CSNK2A3Q8NEV1 391 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 FAM81AQ8TBF8 368 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 THEM6Q8WUY1 208 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 DYRK2Q92630 601 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 TBX15Q96SF7 602 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 BTBD10Q9BSF8 475 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 RTL8AQ9BWD3 113 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 TEX12Q9BXU0 123 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 ZNF556Q9HAH1 456 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 RNPEPL1Q9HAU8 725 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 ARL8BQ9NVJ2 186 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 ACTR3BQ9P1U1 418 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 RNF114Q9Y508 228 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 MMP24Q9Y5R2 645 aa10.15□□□□□ -0.78
TRAF4-202ENST00000262396 A0A1B0GVI7 797 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 A0A1W2PQ09 198 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms