RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TMEM171Q8WVE6 324 aa17.78■□□□□ 0.44
RTCA-201ENST00000260563 C12orf43Q96C57 262 aaKnown RBP17.78■□□□□ 0.44
RTCA-201ENST00000260563 TXNL4BQ9NX01 149 aaKnown RBP17.78■□□□□ 0.44
RTCA-201ENST00000260563 HHLA2Q9UM44 414 aa17.78■□□□□ 0.44
RTCA-201ENST00000260563 TRBV5-5A0A0J9YX44 114 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 VSTM5A8MXK1 200 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 IGLV3-1P01715 115 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 OCM2P0CE71 109 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 APOBEC3AP31941 199 aaPredicted RBP17.77■□□□□ 0.44
RTCA-201ENST00000260563 VBP1P61758 197 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 GFOD2Q3B7J2 385 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 Q499Y3 187 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 SPATA46Q5T0L3 261 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 C22orf42Q6IC83 251 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 C20orf204Q6ZNR8 217 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 CEACAM19Q7Z692 300 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 COMMD2Q86X83 199 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 FBXL14Q8N1E6 418 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 ZNF611Q8N823 705 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 OR51A4Q8NGJ6 313 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 OR5L1Q8NGL2 311 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 TSEN15Q8WW01 171 aaKnown RBP17.77■□□□□ 0.44
RTCA-201ENST00000260563 OR14A2Q96R54 314 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 RNF167Q9H6Y7 350 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 GPR84Q9NQS5 396 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 CMAHPQ9Y471 501 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 LRBAP50851 2863 aa17.77■□□□□ 0.44
RTCA-201ENST00000260563 ASH1LQ9NR48 2969 aaKnown RBP17.77■□□□□ 0.44
RTCA-201ENST00000260563 A0A1B0GTI1 187 aa17.77■□□□□ 0.43
RTCA-201ENST00000260563 A0A1B0GVI7 797 aa17.77■□□□□ 0.43
RTCA-201ENST00000260563 ZNF879B4DU55 563 aa17.77■□□□□ 0.43
RTCA-201ENST00000260563 SYT7O43581 403 aa17.77■□□□□ 0.43
RTCA-201ENST00000260563 GATBO75879 557 aaKnown RBP17.77■□□□□ 0.43
RTCA-201ENST00000260563 NCS1P62166 190 aa17.77■□□□□ 0.43
RTCA-201ENST00000260563 CACNA1DQ01668 2161 aa17.77■□□□□ 0.43
RTCA-201ENST00000260563 ZMAT1Q5H9K5 638 aa17.77■□□□□ 0.43
RTCA-201ENST00000260563 PAMR1Q6UXH9 720 aa17.77■□□□□ 0.43
RTCA-201ENST00000260563 MUC15Q8N387 334 aa17.77■□□□□ 0.43
RTCA-201ENST00000260563 SLC25A40Q8TBP6 338 aa17.77■□□□□ 0.43
RTCA-201ENST00000260563 SGK3Q96BR1 496 aa17.77■□□□□ 0.43
RTCA-201ENST00000260563 OR2J1Q9GZK6 312 aa17.77■□□□□ 0.43
RTCA-201ENST00000260563 DHDHQ9UQ10 334 aa17.77■□□□□ 0.43
RTCA-201ENST00000260563 GSTK1Q9Y2Q3 226 aa17.77■□□□□ 0.43
RTCA-201ENST00000260563 FBN2P35556 2912 aa17.77■□□□□ 0.43
RTCA-201ENST00000260563 UNC79Q9P2D8 2635 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 XRCC2O43543 280 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 OR4A8P0C604 315 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 CCL1P22362 96 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 TUBG1P23258 451 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 TGFBR1P36897 503 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 MAGEB1P43366 347 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 KRTAP10-9P60411 292 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 ADIPOQQ15848 244 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 GLYATL3Q5SZD4 288 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 UNQ9370/PRO34162Q6UXP9 181 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 DOK3Q7L591 496 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 MRPL24Q96A35 216 aaKnown RBP17.76■□□□□ 0.43
RTCA-201ENST00000260563 REEP6Q96HR9 211 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 LYZL4Q96KX0 146 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 RGCCQ9H4X1 137 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 TUBG2Q9NRH3 451 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 ZNF391Q9UJN7 358 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 FZR1Q9UM11 496 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 STARD10Q9Y365 291 aa17.76■□□□□ 0.43
RTCA-201ENST00000260563 SLC22A1O15245 554 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 ATE1O95260 518 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 MAPK3P27361 379 aaPredicted RBP17.75■□□□□ 0.43
RTCA-201ENST00000260563 GCH1P30793 250 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 SOX2P48431 317 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 MALLQ13021 153 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 ZNF718Q3SXZ3 478 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 OR13C3Q8NGS6 347 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 OR2AE1Q8NHA4 323 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 PHYHIPQ92561 330 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 THRSPQ92748 146 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 FAM71F1Q96KD3 344 aaPredicted RBP17.75■□□□□ 0.43
RTCA-201ENST00000260563 KCTD7Q96MP8 289 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 DERL3Q96Q80 235 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 SOX7Q9BT81 388 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 POFUT1Q9H488 388 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 PLK3Q9H4B4 646 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 PTTG3PQ9NZH4 202 aa17.75■□□□□ 0.43
RTCA-201ENST00000260563 SERPINF1P36955 418 aa17.74■□□□□ 0.43
RTCA-201ENST00000260563 MSMPQ1L6U9 139 aa17.74■□□□□ 0.43
RTCA-201ENST00000260563 AGAP6Q5VW22 663 aa17.74■□□□□ 0.43
RTCA-201ENST00000260563 PLPP7Q8NBV4 271 aa17.74■□□□□ 0.43
RTCA-201ENST00000260563 SYNPRQ8TBG9 265 aa17.74■□□□□ 0.43
RTCA-201ENST00000260563 TMEM106AQ96A25 262 aa17.74■□□□□ 0.43
RTCA-201ENST00000260563 MARS2Q96GW9 593 aaKnown RBP17.74■□□□□ 0.43
RTCA-201ENST00000260563 A0A1W2PPK0 400 aa17.73■□□□□ 0.43
RTCA-201ENST00000260563 UCHL1P09936 223 aa17.73■□□□□ 0.43
RTCA-201ENST00000260563 DANCRP0C864 163 aa17.73■□□□□ 0.43
RTCA-201ENST00000260563 ZNF250P15622 560 aa17.73■□□□□ 0.43
RTCA-201ENST00000260563 ZNF12P17014 697 aa17.73■□□□□ 0.43
RTCA-201ENST00000260563 KLF3P57682 345 aaPredicted RBP17.73■□□□□ 0.43
RTCA-201ENST00000260563 SELENOVP59797 346 aa17.73■□□□□ 0.43
RTCA-201ENST00000260563 ZNF92Q03936 586 aa17.73■□□□□ 0.43
RTCA-201ENST00000260563 FAM27D1Q5T7N8 215 aa17.73■□□□□ 0.43
RTCA-201ENST00000260563 MBNL2Q5VZF2 373 aaKnown RBP17.73■□□□□ 0.43
RTCA-201ENST00000260563 CCDC54Q8NEL0 328 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms