RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 FBXW9Q5XUX1 488 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 DOK3Q7L591 496 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 OR13C9Q8NGT0 318 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 OR14K1Q8NGZ2 314 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 OR2AE1Q8NHA4 323 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 GP6Q9HCN6 339 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 MYO7BQ6PIF6 2116 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 CACNA1GO43497 2377 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 CTDSPLO15194 276 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 IL18BPO95998 194 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 IGLV3-1P01715 115 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 TMIGD3P0DMS9 266 aaPredicted RBP16.47■□□□□ 0.23
TRIM47-201ENST00000254816 CD79AP11912 226 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 PRSS12P56730 875 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 ECH1Q13011 328 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 SNTB2Q13425 540 aaKnown RBP16.47■□□□□ 0.23
TRIM47-201ENST00000254816 TMEM255AQ5JRV8 349 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 GLT8D1Q68CQ7 371 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 JAGN1Q8N5M9 183 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 CNEP1R1Q8N9A8 125 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 BEST4Q8NFU0 473 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 OR11H7Q8NGC8 314 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 C7orf66A4D0T2 115 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 APOC1P02654 83 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 LCATP04180 440 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 STK11Q15831 433 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 ACSF3Q4G176 576 aaPredicted RBP16.46■□□□□ 0.23
TRIM47-201ENST00000254816 HIKESHIQ53FT3 197 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 GLYATL3Q5SZD4 288 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 SFRP4Q6FHJ7 346 aaPredicted RBP16.46■□□□□ 0.23
TRIM47-201ENST00000254816 DRAM2Q6UX65 266 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 ZNF627Q7L945 461 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 LIX1LQ8IVB5 337 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 OR1M1Q8NGA1 313 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 OR52N4Q8NGI2 321 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 LILRB4Q8NHJ6 448 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 MS4A3Q96HJ5 214 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 SLA2Q9H6Q3 261 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 NKIRAS2Q9NYR9 191 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 KLK11Q9UBX7 282 aa16.46■□□□□ 0.23
TRIM47-201ENST00000254816 SLC17A2O00624 439 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 GMDSO60547 372 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 CDK2P24941 298 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 PTH2RP49190 550 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 RAB11BQ15907 218 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 KRTAP27-1Q3LI81 207 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 RPUSD3Q6P087 351 aaKnown RBP16.45■□□□□ 0.22
TRIM47-201ENST00000254816 FAM214BQ7L5A3 538 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 RNF144BQ7Z419 303 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 DACT3Q96B18 629 aaPredicted RBP16.45■□□□□ 0.22
TRIM47-201ENST00000254816 SGK3Q96BR1 496 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 CMTM3Q96MX0 182 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 ZNF222Q9UK12 451 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 A0A0U1RQV5 110 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 H2AFB2P0C5Z0 115 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 CCL2P13500 99 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 S100A1P23297 94 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 STOMP27105 288 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 MPGP29372 298 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 BDKRB2P30411 391 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 POU3F4P49335 361 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 TNK1Q13470 666 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 TMEM69Q5SWH9 247 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 FAM166AQ6J272 317 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 VWA1Q6PCB0 445 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 OR5D14Q8NGL3 314 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 GIMAP1Q8WWP7 306 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 SLC25A28Q96A46 364 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 SPACA5Q96QH8 159 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 OR10A2Q9H208 303 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 OR51J1Q9H342 316 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 PLEKHA1Q9HB21 404 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 GLRX2Q9NS18 164 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 MYEF2Q9P2K5 600 aaKnown RBP16.45■□□□□ 0.22
TRIM47-201ENST00000254816 DKK4Q9UBT3 224 aa16.45■□□□□ 0.22
TRIM47-201ENST00000254816 TTLL8A6PVC2 850 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 FABP7O15540 132 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 HTR2CP28335 458 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 EFNB2P52799 333 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 FOXF2Q12947 444 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 C2orf76Q3KRA6 126 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 LAMTOR1Q6IAA8 161 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 TFAP2EQ6VUC0 442 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 OR1K1Q8NGR3 316 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 FAM3DQ96BQ1 224 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 S100A16Q96FQ6 103 aaKnown RBP16.44■□□□□ 0.22
TRIM47-201ENST00000254816 GPR137Q96N19 417 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 FLVCR2Q9UPI3 526 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 PTPRQQ9UMZ3 2332 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 INTS1Q8N201 2190 aaKnown RBP16.44■□□□□ 0.22
TRIM47-201ENST00000254816 PIEZO2Q9H5I5 2752 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 OR14I1A6ND48 311 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 AHRRA9YTQ3 701 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 CRYABP02511 175 aaKnown RBP16.44■□□□□ 0.22
TRIM47-201ENST00000254816 CXCL3P19876 107 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 RAB3AP20336 220 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 CCNOP22674 350 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 GUSBP1Q15486 140 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 FAAP20Q6NZ36 180 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 OR4D6Q8NGJ1 314 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms