RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 GALR2O43603 387 aaPredicted RBP16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 PATE4P0C8F1 98 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 MPLP40238 635 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 FOXB1Q99853 325 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 TMPRSS13Q9BYE2 586 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 BARX1Q9HBU1 254 aaPredicted RBP16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 TRGV5A0A0B4J1U4 118 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 A0A1B0GTH9 108 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 GABRB1P18505 474 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 SCARB1Q8WTV0 552 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 CTRB1P17538 263 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 CTRB2Q6GPI1 263 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 PRR27Q6MZM9 219 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 SIRT5Q9NXA8 310 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 P4HTMQ9NXG6 502 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 ANKUB1A6NFN9 424 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 K7EQM0 130 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 BAK1Q16611 211 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 FAM122CQ6P4D5 195 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 FAM103A1Q9BTL3 118 aaKnown RBP16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 FBXL4Q9UKA2 621 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 OR4E1P0C645 316 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 DSCR4P56555 118 aaPredicted RBP16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 SLC25A19Q9HC21 320 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 ASPDHA6ND91 283 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 OSR2Q8N2R0 312 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 COMMD5Q9GZQ3 224 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 IL9P15248 144 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 TBPP20226 339 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 BMP5P22003 454 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 ZNF766Q5HY98 468 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 AVPI1Q5T686 147 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 N4BP2Q86UW6 1770 aaPredicted RBP16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 AKR7A2O43488 359 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 SP6Q3SY56 376 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 FOXB2Q5VYV0 432 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 IP6K3Q96PC2 410 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 NCBP2LA6PVI3 153 aaKnown RBP16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 Q6ZNX1 250 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 CMBLQ96DG6 245 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 S1PR3Q99500 378 aa16.81■□□□□ 0.28
SMARCC1-201ENST00000254480 TRPM3Q9HCF6 1732 aaPredicted RBP16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 RER1O15258 196 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 SLC25A6P12236 298 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 FAHD1Q6P587 224 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 MOB3BQ86TA1 216 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 TNFRSF19Q9NS68 423 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 ONECUT1Q9UBC0 465 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 PXDC1Q5TGL8 231 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 OR2T2Q6IF00 324 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 DYNC2LI1Q8TCX1 351 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 CCDC187A0A096LP49 1063 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 NME1P15531 152 aaKnown RBP16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 GPR3P46089 330 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 CDH26Q8IXH8 852 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 OR10P1Q8NGE3 313 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 CTXN2P0C2S0 81 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 PSENENQ9NZ42 101 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 SSC5DA1L4H1 1573 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 AQP6Q13520 282 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 HIST2H3AQ71DI3 136 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 MRGPRX3Q96LB0 322 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 DUSP21Q9H596 190 aa16.8■□□□□ 0.28
SMARCC1-201ENST00000254480 LRP5LA4QPB2 252 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 RPL12P30050 165 aaKnown RBP16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 DDOSTP39656 456 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 EVX1P49640 407 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 CLCF1Q9UBD9 225 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 GLULP15104 373 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 NLRC3Q7RTR2 1065 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 UBE3DQ7Z6J8 389 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 OR4C16Q8NGL9 310 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 FBXO8Q9NRD0 319 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 SPNP16150 400 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 NTF3P20783 257 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 MEOX1P50221 254 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 C4orf17Q53FE4 359 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 RPL7L1Q6DKI1 246 aaKnown RBP16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 CREB3L2Q70SY1 520 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 SYS1Q8N2H4 156 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 APH1BQ8WW43 257 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 ACY3Q96HD9 319 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 TGIF2Q9GZN2 237 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 TREM2Q9NZC2 230 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 LAMB1P07942 1786 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 SPAG17Q6Q759 2223 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 SULT1C4O75897 302 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 ASAH1Q13510 395 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 KMT5CQ86Y97 462 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 RFESDQ8TAC1 157 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 ERGIC1Q969X5 290 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 SCPEP1Q9HB40 452 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 HDGFL3Q9Y3E1 203 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 LILRA5A6NI73 299 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 ADRA2CP18825 462 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 PSMB6P28072 239 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 ADPRHL1Q8NDY3 354 aa16.79■□□□□ 0.28
SMARCC1-201ENST00000254480 LYZL6O75951 148 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 LALBAP00709 142 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 FZD5Q13467 585 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms