RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 MFSD8Q8NHS3 518 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 ELP5Q8TE02 316 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 EIF5A2Q9GZV4 153 aaKnown RBP8.96□□□□□ -0.98
COPB1-201ENST00000249923 UPB1Q9UBR1 384 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 IGLV3-12A0A075B6K2 115 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 PRSS44E7EML9 344 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 ZNF208O43345 1280 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 OR2T1O43869 369 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 TLE3Q04726 772 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 MYBPHQ13203 477 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 PLAC9Q5JTB6 97 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 TMPPEQ6ZT21 453 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 PBOV1Q9GZY1 135 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 MYOZ1Q9NP98 299 aaPredicted RBP8.96□□□□□ -0.98
COPB1-201ENST00000249923 CHST11Q9NPF2 352 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 PNRC2Q9NPJ4 139 aaKnown RBP8.96□□□□□ -0.98
COPB1-201ENST00000249923 MYO7BQ6PIF6 2116 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 ZFHX4Q86UP3 3567 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 NPIPA5E9PKD4 350 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 LY86O95711 162 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 UBBP0CG47 229 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 UBCP0CG48 685 aaKnown RBP8.95□□□□□ -0.98
COPB1-201ENST00000249923 GLB1P16278 677 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 ABOP16442 354 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 HRH1P35367 487 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 CD96P40200 585 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 RSPO4Q2I0M5 234 aaPredicted RBP8.95□□□□□ -0.98
COPB1-201ENST00000249923 PLXDC1Q8IUK5 500 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 CADM4Q8NFZ8 388 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 OR10G3Q8NGC4 313 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 CNTNAP3BQ96NU0 1288 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 TGIF2Q9GZN2 237 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 BIN3Q9NQY0 253 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 SLC2A8Q9NY64 477 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 GPN3Q9UHW5 284 aaPredicted RBP8.95□□□□□ -0.98
COPB1-201ENST00000249923 GLS2Q9UI32 602 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 NPIPA1Q9UND3 350 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 LY6G6EA0A0G2JKS1 128 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 MBTPS2O43462 519 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 DUX1O43812 170 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 RAD51DO75771 328 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 PMP2P02689 132 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 ARL4DP49703 201 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 PLPPR5Q32ZL2 321 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 RBMS3Q6XE24 437 aaKnown RBP8.95□□□□□ -0.98
COPB1-201ENST00000249923 RAB11FIP2Q7L804 512 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 TRAPPC6BQ86SZ2 158 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 OR5AS1Q8N127 324 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 BHLHE23Q8NDY6 225 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 OR13C9Q8NGT0 318 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 ST8SIA1Q92185 356 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 PTX4Q96A99 478 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 SLC25A21Q9BQT8 299 aaPredicted RBP8.95□□□□□ -0.98
COPB1-201ENST00000249923 SEC61A2Q9H9S3 476 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 TNFSF18Q9UNG2 199 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 URGCP-MRPS24S4R325 110 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 U3KQA8 63 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 LOC400499M0QZD8 3231 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 A0A1W2PNR3 127 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 PGA4P0DJD7 388 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 PGA3P0DJD8 388 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 CNR1P21554 472 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 SMAD4Q13485 552 aaKnown RBP8.95□□□□□ -0.98
COPB1-201ENST00000249923 PEA15Q15121 130 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 PLEKHN1Q494U1 663 aaPredicted RBP8.95□□□□□ -0.98
COPB1-201ENST00000249923 RHBDD2Q6NTF9 364 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 OR51E1Q8TCB6 317 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 THRSPQ92748 146 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 IFT22Q9H7X7 185 aa8.95□□□□□ -0.98
COPB1-201ENST00000249923 A0A0A6YYH2 397 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 A6NJ64 397 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 NPIPB13A6NJU9 1138 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 NPIPB4C9JG80 1138 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 TRAF3IP2O43734 574 aaPredicted RBP8.94□□□□□ -0.98
COPB1-201ENST00000249923 DKK1O94907 266 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 IL2RAP01589 272 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 H2BFMP0C1H6 154 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 ZNF823P16415 610 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 ID4P47928 161 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 NPY4RP50391 375 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 CHAF1BQ13112 559 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 SLC25A42Q86VD7 318 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 ROBO4Q8WZ75 1007 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 ZNF775Q96BV0 537 aaPredicted RBP8.94□□□□□ -0.98
COPB1-201ENST00000249923 ST6GALNAC5Q9BVH7 336 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 A0A1W2PNV4 684 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 TMEM14DPA8MWL7 114 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 RER1O15258 196 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 MED6O75586 246 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 CRYBA1P05813 215 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 CPT2P23786 658 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 FLI1Q01543 452 aaPredicted RBP8.94□□□□□ -0.98
COPB1-201ENST00000249923 C17orf67Q0P5P2 114 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 SHEQ5VZ18 495 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 ZNF385CQ66K41 422 aaPredicted RBP8.94□□□□□ -0.98
COPB1-201ENST00000249923 WDR74Q6RFH5 385 aaPredicted RBP8.94□□□□□ -0.98
COPB1-201ENST00000249923 TFAP2EQ6VUC0 442 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 OR1M1Q8NGA1 313 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 OR6S1Q8NH40 331 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 S100PBPQ96BU1 408 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms