RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 NKAIN3Q8N8D7 197 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 HGDQ93099 445 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 OR14J1Q9UGF5 321 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 TK1P04183 234 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 GLRA1P23415 457 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 EFNA3P52797 238 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 PCBD1P61457 104 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 TMEM255AQ5JRV8 349 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ATPAF1Q5TC12 328 aaPredicted RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 OR4D10Q8NGI6 311 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 OR2G3Q8NGZ4 309 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ZNRF4Q8WWF5 429 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 SEH1LQ96EE3 360 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 LRFN5Q96NI6 719 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 PAPOLGQ9BWT3 736 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 NIT2Q9NQR4 276 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 OR5H15A6NDH6 313 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 HMSDA8MTL9 139 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 CDK2AP1O14519 115 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ADAP1O75689 374 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 OR2J2O76002 312 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 GABRA1P14867 456 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 FOSL2P15408 326 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 CCR5P51681 352 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 MFGE8Q08431 387 aaPredicted RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 PGAP1Q75T13 922 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 SLC16A14Q7RTX9 510 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ADAD2Q8NCV1 583 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 OR6K3Q8NGY3 331 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 SDSLQ96GA7 329 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF175Q9Y473 711 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 C9orf170A2RU37 121 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 GJE1A6NN92 205 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 PLPP3O14495 311 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF217O75362 1048 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 LPCAT3Q6P1A2 487 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 CD200R1LQ6Q8B3 271 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 DPPA2Q7Z7J5 298 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 FBXL14Q8N1E6 418 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 LILRB2Q8N423 598 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 BVESQ8NE79 360 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 APOBEC4Q8WW27 367 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 MRPL38Q96DV4 380 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 RHOFQ9HBH0 211 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 LRFN1Q9P244 771 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 KCNE5Q9UJ90 142 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ANGPTL7O43827 346 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 NGFRP08138 427 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 DUSP1P28562 367 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 THBS2P35442 1172 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 FLI1Q01543 452 aaPredicted RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 TERB2Q8NHR7 220 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 SNIP1Q8TAD8 396 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 TMEM74BQ9NUR3 256 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 K7EQS6 105 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 HLA-DQB1P01920 261 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 MSX1P28360 303 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 APOBEC1P41238 236 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 RPL23AP62750 156 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 GRB2P62993 217 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 MPPED2Q15777 294 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 TMEM123Q8N131 208 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 CMTM3Q96MX0 182 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 VSTM2LQ96N03 204 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 STRADBQ9C0K7 418 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 SLC17A5Q9NRA2 495 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 VSIG4Q9Y279 399 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 IGHV3-64DA0A0J9YX35 117 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 LOC102725191A0A1B0GVB3 256 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 MSTNO14793 375 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ELLP55199 621 aaPredicted RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 PJVKQ0ZLH3 352 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 C11orf87Q6NUJ2 197 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 CLRN3Q8NCR9 226 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 LRRC61Q9BV99 259 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 UNKLQ9H9P5 680 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 URGCP-MRPS24S4R325 110 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 A0A1B0GX78 115 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 METTL12A8MUP2 240 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF705FA8MVS1 300 aaPredicted RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 GSTP1P09211 210 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF705DP0CH99 300 aaPredicted RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF705BP0CI00 300 aaPredicted RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 DAOP14920 347 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 S100A12P80511 92 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 SSBP1Q04837 148 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 YRDCQ86U90 279 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 TMEM217Q8N7C4 229 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 DTWD2Q8NBA8 298 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 GJC3Q8NFK1 279 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 GPBAR1Q8TDU6 330 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 HAO2Q9NYQ3 351 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 PLSCR5A0PG75 271 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 TTLL8A6PVC2 850 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF724A8MTY0 619 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 ST8SIA3O43173 380 aa4.13□□□□□ -1.75
VPS13C-201ENST00000249837 RPL12P30050 165 aaKnown RBP4.13□□□□□ -1.75
VPS13C-201ENST00000249837 MYBPHQ13203 477 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms