RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 COQ8AQ8NI60 647 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 KCNG3Q8TAE7 436 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 SCARB1Q8WTV0 552 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 PGAM5Q96HS1 289 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 DKKL1Q9UK85 242 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 WDFY4Q6ZS81 3184 aa17.19■□□□□ 0.34
CDC42EP1-201ENST00000249014 NSG1A0A0A6YYJ2 146 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 OR5H14A6NHG9 310 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 NPIPA2E9PIF3 369 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 F5H5K5 113 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 NPIPA3F8WFD2 350 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 RAD51DO75771 328 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 IL2RAP01589 272 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 MPGP29372 298 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 SRSF4Q08170 494 aaKnown RBP17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 RIPPLY1Q0D2K3 151 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 RSPO1Q2MKA7 263 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 ZNF660Q6AZW8 331 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 NAXDQ8IW45 347 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 ADAD2Q8NCV1 583 aaKnown RBP17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 ST8SIA4Q92187 359 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 RAB3CQ96E17 227 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 TMEM59Q9BXS4 323 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 REG4Q9BYZ8 158 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 NCKAP5O14513 1909 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 A0A0J9YW62 118 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 C9orf170A2RU37 121 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 TNFSF11O14788 317 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 EIF1BO60739 113 aaKnown RBP17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 SCO1O75880 301 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 CALCRP30988 508 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 ZNF133P52736 654 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 MLF1P58340 268 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 GK2Q14410 553 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 RGS7BPQ6MZT1 257 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 FOXL2NBQ6ZUU3 175 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 MAML2Q8IZL2 1156 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 ZIC4Q8N9L1 334 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 GJC3Q8NFK1 279 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 LRRC20Q8TCA0 184 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 RBPMSQ93062 196 aaKnown RBP17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 SEC22AQ96IW7 307 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 GPER1Q99527 375 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 HPF1Q9NWY4 346 aa17.18■□□□□ 0.34
CDC42EP1-201ENST00000249014 hCG_1807616A0A1W2PRN6 198 aa17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 NR2C1P13056 603 aa17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 HIST1H1DP16402 221 aaKnown RBP17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 GUCA1AP43080 201 aaPredicted RBP17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 SLC6A9P48067 706 aa17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 RSPO4Q2I0M5 234 aaPredicted RBP17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 SIGIRRQ6IA17 410 aa17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 C1QL2Q7Z5L3 287 aa17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 ZNF546Q86UE3 836 aa17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 OR5D18Q8NGL1 313 aa17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 OR6K3Q8NGY3 331 aa17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 OR4K15Q8NH41 348 aa17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 NPRL2Q8WTW4 380 aa17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 ZNF837Q96EG3 531 aaPredicted RBP17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 CCDC120Q96HB5 630 aa17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 DMRTA2Q96SC8 542 aa17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 RBM24Q9BX46 236 aaKnown RBP17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 SRXN1Q9BYN0 137 aa17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 ZNF224Q9NZL3 707 aa17.17■□□□□ 0.34
CDC42EP1-201ENST00000249014 ZSCAN5BA6NJL1 495 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 CRTAPO75718 401 aaPredicted RBP17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 VAMP5O95183 116 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 GSTP1P09211 210 aaKnown RBP17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 IL13RA1P78552 427 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 MICBQ29980 383 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 TRIM61Q5EBN2 209 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 MITD1Q8WV92 249 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 SLC39A1Q9NY26 324 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 FOXD3Q9UJU5 478 aaPredicted RBP17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 ANAPC10Q9UM13 185 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 COLQQ9Y215 455 aaPredicted RBP17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 A0A0G2JMM0 328 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 A0A1W2PPB8 328 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 A0A1W2PRS3 328 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 C19orf67A6NJJ6 358 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 KIR3DP1A8MWS1 328 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 EFSO43281 561 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 DHHO43323 396 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 SPDEFO95238 335 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 IFNA6P05013 189 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 TBPP20226 339 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 AVPR2P30518 371 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 FOLR3P41439 243 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 DUSP3P51452 185 aaPredicted RBP17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 LRRC37A5PQ49AS3 106 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 LPCAT3Q6P1A2 487 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 SUN5Q8TC36 379 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 ARHGAP5-AS1Q96IT6 56 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 PDCD10Q9BUL8 212 aa17.16■□□□□ 0.34
CDC42EP1-201ENST00000249014 DBHP09172 617 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 AKR1C4P17516 323 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 RAC1P63000 192 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 CSNK2A1P68400 391 aaPredicted RBP17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 HIST1H3AP68431 136 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 KISS1Q15726 138 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 HIST2H3PS2Q5TEC6 136 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms