RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 OR51D1Q8NGF3 324 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 CPNE2Q96FN4 548 aaPredicted RBP12.33□□□□□ -0.44
SDF2-201ENST00000247020 TECTBQ96PL2 329 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 OCEL1Q9H607 264 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 NOX3Q9HBY0 568 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 MOV10Q9HCE1 1003 aaKnown RBP12.33□□□□□ -0.44
SDF2-201ENST00000247020 FBLN5Q9UBX5 448 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 PIGLQ9Y2B2 252 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 CEP295Q9C0D2 2601 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 A0A0A6YYH2 397 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 A0A0G2JMP0 313 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 A0A0X1KG70 313 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 C5orf63A6NC05 138 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 A6NJ64 397 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 LDLRAD4O15165 306 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 ICMTO60725 284 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 TOXO94900 526 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 BPNT1O95861 308 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 FAM87AP0C7U9 286 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 RAB6AP20340 208 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 HOXC12P31275 282 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 ZNF93P35789 620 aaPredicted RBP12.32□□□□□ -0.44
SDF2-201ENST00000247020 FOXF2Q12947 444 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 TRIQKQ629K1 86 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 KRT74Q7RTS7 529 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 ZNF584Q8IVC4 421 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 CISD2Q8N5K1 135 aaKnown RBP12.32□□□□□ -0.44
SDF2-201ENST00000247020 POC5Q8NA72 575 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 OR4M2Q8NGB6 313 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 OR52N4Q8NGI2 321 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 C14orf119Q9NWQ9 140 aa12.32□□□□□ -0.44
SDF2-201ENST00000247020 INTS1Q8N201 2190 aaKnown RBP12.31□□□□□ -0.44
SDF2-201ENST00000247020 TMEM272A0A1B0GTI8 110 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 C5orf49A4QMS7 147 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 C1QTNF9BB2RNN3 333 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 GSTZ1O43708 216 aaPredicted RBP12.31□□□□□ -0.44
SDF2-201ENST00000247020 RAD51DO75771 328 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 C1QTNF9P0C862 333 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 UBBP0CG47 229 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 EDN3P14138 238 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 FAM3AP98173 230 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 RBPJQ06330 500 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 MALLQ13021 153 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 MRPL49Q13405 166 aaKnown RBP12.31□□□□□ -0.44
SDF2-201ENST00000247020 ASAH1Q13510 395 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 CNN3Q15417 329 aaKnown RBP12.31□□□□□ -0.44
SDF2-201ENST00000247020 TBC1D28Q2M2D7 210 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 TMEM42Q69YG0 159 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 MDP1Q86V88 176 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 C19orf18Q8NEA5 215 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 OR5L1Q8NGL2 311 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 ZCCHC14Q8WYQ9 949 aaKnown RBP12.31□□□□□ -0.44
SDF2-201ENST00000247020 SPSB1Q96BD6 273 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 SNRNP40Q96DI7 357 aaKnown RBP12.31□□□□□ -0.44
SDF2-201ENST00000247020 COX4I2Q96KJ9 171 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 CNTD2Q9H8S5 307 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 TBCCD1Q9NVR7 557 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 GHRLQ9UBU3 117 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 CGGBP1Q9UFW8 167 aaPredicted RBP12.31□□□□□ -0.44
SDF2-201ENST00000247020 SPTBN4Q9H254 2564 aa12.31□□□□□ -0.44
SDF2-201ENST00000247020 A0A1W2PQ09 198 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 XRCC3O43542 346 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 LYZL6O75951 148 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 SCGNO76038 276 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 HCKP08631 526 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 OCMP0CE72 109 aaPredicted RBP12.3□□□□□ -0.44
SDF2-201ENST00000247020 FAHP16930 419 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 ZNF14P17017 642 aaPredicted RBP12.3□□□□□ -0.44
SDF2-201ENST00000247020 ALDH3B1P43353 468 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 GSK3AP49840 483 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 KLRB1Q12918 225 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 FAM189A2Q15884 450 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 CLVS2Q5SYC1 327 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 GFRALQ6UXV0 394 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 OR2W3Q7Z3T1 314 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 FAM169BQ8N8A8 192 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 PNLDC1Q8NA58 520 aaKnown RBP12.3□□□□□ -0.44
SDF2-201ENST00000247020 SLC30A7Q8NEW0 376 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 OR2AE1Q8NHA4 323 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 RFT1Q96AA3 541 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 FAM122AQ96E09 287 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 REPIN1Q9BWE0 567 aaKnown RBP12.3□□□□□ -0.44
SDF2-201ENST00000247020 DIABLOQ9NR28 239 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 TBC1D24Q9ULP9 559 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 AMDHD2Q9Y303 409 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 IGKV1-9A0A0C4DH69 117 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 ZNF816-ZNF321PA0A0X1KG74 233 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 A6NIN4 97 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 CTAG2O75638 210 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 SFTPCP11686 197 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 CBR1P16152 277 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 PRKACBP22694 351 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 ACKR3P25106 362 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 OPRM1P35372 400 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 ZNF92Q03936 586 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 TMEM69Q5SWH9 247 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 ZNF610Q8N9Z0 462 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 OR4D6Q8NGJ1 314 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 SMIM4Q8WVI0 70 aa12.3□□□□□ -0.44
SDF2-201ENST00000247020 ABHD1Q96SE0 405 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms