RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 BBS1Q8NFJ9 593 aa11.54□□□□□ -0.56
DDX39A-201ENST00000242776 OR6K6Q8NGW6 343 aa11.54□□□□□ -0.56
DDX39A-201ENST00000242776 ZNF420Q8TAQ5 688 aaPredicted RBP11.54□□□□□ -0.56
DDX39A-201ENST00000242776 PTP4A1Q93096 173 aa11.54□□□□□ -0.56
DDX39A-201ENST00000242776 ZNF582Q96NG8 517 aaPredicted RBP11.54□□□□□ -0.56
DDX39A-201ENST00000242776 CITED1Q99966 193 aa11.54□□□□□ -0.56
DDX39A-201ENST00000242776 SSBP3Q9BWW4 388 aaPredicted RBP11.54□□□□□ -0.56
DDX39A-201ENST00000242776 HCAR1Q9BXC0 346 aa11.54□□□□□ -0.56
DDX39A-201ENST00000242776 CHIAQ9BZP6 476 aa11.54□□□□□ -0.56
DDX39A-201ENST00000242776 COA3Q9Y2R0 106 aaPredicted RBP11.54□□□□□ -0.56
DDX39A-201ENST00000242776 POLR3KQ9Y2Y1 108 aaPredicted RBP11.54□□□□□ -0.56
DDX39A-201ENST00000242776 A8MXK9 166 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 F5H0A9 414 aaPredicted RBP11.53□□□□□ -0.56
DDX39A-201ENST00000242776 DCTN6O00399 190 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 TIMM23O14925 209 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 PLATP00750 562 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 CD55P08174 381 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 CLUP10909 449 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 SLC2A5P22732 501 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 TNFSF4P23510 183 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 LAP3P28838 519 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 HTR1FP30939 366 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 PYCR1P32322 319 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 LIPAP38571 399 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 GNB2P62879 340 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 POU4F2Q12837 409 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 PSG7Q13046 419 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 ASPHD2Q6ICH7 369 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 ZNF774Q6NX45 483 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 Q6ZR03 302 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 ZNF283Q8N7M2 679 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 CNIH3Q8TBE1 160 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 NABP1Q96AH0 204 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 SIGLEC11Q96RL6 698 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 WNT5BQ9H1J7 359 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 SIAEQ9HAT2 523 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 WARS2Q9UGM6 360 aaKnown RBP11.53□□□□□ -0.56
DDX39A-201ENST00000242776 PPP1R3CQ9UQK1 317 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 UGT2A1Q9Y4X1 527 aa11.53□□□□□ -0.56
DDX39A-201ENST00000242776 IGHV2-70DA0A0C4DH43 119 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 SRRM5B3KS81 715 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 ENTPD6O75354 484 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 ALX3O95076 343 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 CYB5R3P00387 301 aaPredicted RBP11.52□□□□□ -0.56
DDX39A-201ENST00000242776 PRB2P02812 416 aaPredicted RBP11.52□□□□□ -0.56
DDX39A-201ENST00000242776 ADH4P08319 380 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 WNT2P09544 360 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 MSR1P21757 451 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 MDH2P40926 338 aaKnown RBP11.52□□□□□ -0.56
DDX39A-201ENST00000242776 CSNK2BP67870 215 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 MRPS34P82930 218 aaKnown RBP11.52□□□□□ -0.56
DDX39A-201ENST00000242776 CDK5R2Q13319 367 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 ZMAT1Q5H9K5 638 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 LRRN1Q6UXK5 716 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 UNQ6126/PRO20091Q6UXV3 157 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 FOXL2NBQ6ZUU3 175 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 C9orf139Q6ZV77 190 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 BCDIN3DQ7Z5W3 292 aaKnown RBP11.52□□□□□ -0.56
DDX39A-201ENST00000242776 OR5AS1Q8N127 324 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 OR51L1Q8NGJ5 315 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 FBLIM1Q8WUP2 373 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 APH1BQ8WW43 257 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 UPRTQ96BW1 309 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 C4orf45Q96LM5 186 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 OR2H1Q9GZK4 316 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 RPL36Q9Y3U8 105 aaKnown RBP11.52□□□□□ -0.56
DDX39A-201ENST00000242776 LRRC42Q9Y546 428 aa11.52□□□□□ -0.56
DDX39A-201ENST00000242776 A0A1B0GUS0 222 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 IRGMA1A4Y4 181 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 CLPSL1A2RUU4 121 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 CCDC182A6NF36 153 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 WBP4O75554 376 aaKnown RBP11.51□□□□□ -0.57
DDX39A-201ENST00000242776 ZNF823P16415 610 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 TNFRSF1AP19438 455 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 GSTT1P30711 240 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 FGF12P61328 243 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 FAM201AQ5SY85 155 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 KLBQ86Z14 1044 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 SLC26A10Q8NG04 563 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 RAB40AQ8WXH6 277 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 OR2V2Q96R30 315 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 TEAD3Q99594 435 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 POLE4Q9NR33 117 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 HAO2Q9NYQ3 351 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 KCNG2Q9UJ96 466 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 LRCH1Q9Y2L9 728 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 POLR1DQ9Y2S0 133 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 RNF114Q9Y508 228 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 TMEM178BH3BS89 294 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 FAM20BO75063 409 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 ABHD16AO95870 558 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 DBTP11182 482 aaKnown RBP11.51□□□□□ -0.57
DDX39A-201ENST00000242776 SELEP16581 610 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 ATP6V1E1P36543 226 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 CXCR4P61073 352 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 LSM6P62312 80 aaKnown RBP11.51□□□□□ -0.57
DDX39A-201ENST00000242776 PAX2Q02962 417 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 ZNF91Q05481 1191 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 C6orf141Q5SZD1 244 aa11.51□□□□□ -0.57
DDX39A-201ENST00000242776 LINC01590Q5TEZ4 76 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms