RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 HAO2Q9NYQ3 351 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 MMACHCQ9Y4U1 282 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 SPTY2D1-AS1A0A0U1RR47 76 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 PTP4A3O75365 173 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 FREM3P0C091 2139 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 CT45A8P0DMV1 189 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 CT45A9P0DMV2 189 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 SLC37A1P57057 533 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 CT45A2Q5DJT8 189 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 ELFN2Q5R3F8 820 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 SLC22A25Q6T423 547 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 HIST2H3AQ71DI3 136 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 MISPQ8IVT2 679 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 IL22RA1Q8N6P7 574 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 RNF128Q8TEB7 428 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 SEH1LQ96EE3 360 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 RSRP1Q9BUV0 290 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 LRRC61Q9BV99 259 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 C9orf170A2RU37 121 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 CDK2AP1O14519 115 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 HSD17B6O14756 317 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 BCAT2O15382 392 aaPredicted RBP12.31□□□□□ -0.44
NFKB1-201ENST00000226574 PIGPP57054 158 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 TMEM128Q5BJH2 165 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 TSPO2Q5TGU0 170 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 RPL7L1Q6DKI1 246 aaKnown RBP12.31□□□□□ -0.44
NFKB1-201ENST00000226574 C19orf48Q6RUI8 117 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 TMEM229BQ8NBD8 167 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 OR2AE1Q8NHA4 323 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 LIPHQ8WWY8 451 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 RDH5Q92781 318 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 PLXNB2O15031 1838 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 NSG1A0A0A6YYJ2 146 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 PRSS44E7EML9 344 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 ST8SIA3O43173 380 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 H2BFSP57053 126 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 RPL23AP62750 156 aaKnown RBP12.31□□□□□ -0.44
NFKB1-201ENST00000226574 EIF2S3LQ2VIR3 472 aaKnown RBP12.31□□□□□ -0.44
NFKB1-201ENST00000226574 FAM199XQ6PEV8 388 aaPredicted RBP12.31□□□□□ -0.44
NFKB1-201ENST00000226574 STPG2Q8N412 459 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 GJC3Q8NFK1 279 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 ZNRF4Q8WWF5 429 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 REEP6Q96HR9 211 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 HS3ST3A1Q9Y663 406 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 ZNF705FA8MVS1 300 aaPredicted RBP12.31□□□□□ -0.44
NFKB1-201ENST00000226574 SOCS1O15524 211 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 ZNF705DP0CH99 300 aaPredicted RBP12.31□□□□□ -0.44
NFKB1-201ENST00000226574 ZNF705BP0CI00 300 aaPredicted RBP12.31□□□□□ -0.44
NFKB1-201ENST00000226574 CD37P11049 281 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 DEFA6Q01524 100 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 ACTBL2Q562R1 376 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 C6orf201Q7Z4U5 140 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 NAXDQ8IW45 347 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 FAM24BQ8N5W8 94 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 TMEM104Q8NE00 496 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 RTN4IP1Q8WWV3 396 aaPredicted RBP12.31□□□□□ -0.44
NFKB1-201ENST00000226574 LRFN5Q96NI6 719 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 LTBP1Q14766 1721 aa12.31□□□□□ -0.44
NFKB1-201ENST00000226574 M0R135 149 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 HS3ST1O14792 307 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 ARG1P05089 322 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 ELLP55199 621 aaPredicted RBP12.3□□□□□ -0.44
NFKB1-201ENST00000226574 DCDP81605 110 aaKnown RBP12.3□□□□□ -0.44
NFKB1-201ENST00000226574 RIPPLY1Q0D2K3 151 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 MGAT2Q10469 447 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 TMEM164Q5U3C3 297 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 ZNF813Q6ZN06 617 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 SEMA6DQ8NFY4 1073 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 SGK3Q96BR1 496 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 RBMXL1Q96E39 390 aaKnown RBP12.3□□□□□ -0.44
NFKB1-201ENST00000226574 ZNF799Q96GE5 643 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 UBL7Q96S82 380 aaPredicted RBP12.3□□□□□ -0.44
NFKB1-201ENST00000226574 CALHM2Q9HA72 323 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 BRWD3Q6RI45 1802 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 A0A096LPE4 126 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 A0A1W2PP11 408 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 A0A1W2PPZ6 126 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 RNASEK-C17orf49H0YIS7 233 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 RAB27BO00194 218 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 OR3A4PP47883 348 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 KCNJ3P48549 501 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 CNN3Q15417 329 aaKnown RBP12.3□□□□□ -0.44
NFKB1-201ENST00000226574 OR2B11Q5JQS5 317 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 AADACL3Q5VUY0 350 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 OR8G2PQ6IF36 304 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 MITD1Q8WV92 249 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 PSMF1Q92530 271 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 ABCA1O95477 2261 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 HLA-HP01893 362 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 ADRA2CP18825 462 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 TMEM268Q5VZI3 342 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 PGAP1Q75T13 922 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 ADAD2Q8NCV1 583 aaKnown RBP12.3□□□□□ -0.44
NFKB1-201ENST00000226574 AKR7LQ8NHP1 331 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 RXFP4Q8TDU9 374 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 GNRHR2Q96P88 292 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 MMP17Q9ULZ9 603 aa12.3□□□□□ -0.44
NFKB1-201ENST00000226574 WNK2Q9Y3S1 2297 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 OR2C1O95371 312 aa12.29□□□□□ -0.44
NFKB1-201ENST00000226574 FOLR1P15328 257 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms