RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 SGCAQ16586 387 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 SMN1Q16637 294 aaKnown RBP4.88□□□□□ -1.63
AFP-201ENST00000226359 THEM4Q5T1C6 240 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 C10orf128Q5T292 105 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 SLX4IPQ5VYV7 408 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 C11orf71Q6IPW1 123 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 AHSA2Q719I0 299 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 PRSS48Q7RTY5 328 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 ZER1Q7Z7L7 766 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 C1orf174Q8IYL3 243 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 LRRC17Q8N6Y2 441 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 SYT14Q8NB59 555 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 SLC30A7Q8NEW0 376 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 OR13F1Q8NGS4 319 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 ZNF420Q8TAQ5 688 aaPredicted RBP4.88□□□□□ -1.63
AFP-201ENST00000226359 FANK1Q8TC84 345 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 APH1BQ8WW43 257 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 TRUB1Q8WWH5 349 aaKnown RBP4.88□□□□□ -1.63
AFP-201ENST00000226359 SGCDQ92629 289 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 MCHR2Q969V1 340 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 COPS4Q9BT78 406 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 PRRG3Q9BZD7 231 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 BCL2L14Q9BZR8 327 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 SIAEQ9HAT2 523 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 NOX3Q9HBY0 568 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 MEPEQ9NQ76 525 aaPredicted RBP4.88□□□□□ -1.63
AFP-201ENST00000226359 MAN2C1Q9NTJ4 1040 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 TAS2R5Q9NYW4 299 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 TVP23BQ9NYZ1 205 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 PDZD2O15018 2839 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 PCNX3Q9H6A9 2034 aa4.88□□□□□ -1.63
AFP-201ENST00000226359 SNTNA6NMZ2 147 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 ZNF701M0R085 212 aaPredicted RBP4.87□□□□□ -1.63
AFP-201ENST00000226359 SYNGR3O43761 229 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 TLX2O43763 284 aaPredicted RBP4.87□□□□□ -1.63
AFP-201ENST00000226359 NDUFB2O95178 105 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 FADS2O95864 444 aaKnown RBP4.87□□□□□ -1.63
AFP-201ENST00000226359 LY6G6DO95868 133 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 CD8AP01732 235 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 THY1P04216 161 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 SERPINA5P05154 406 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 LCKP06239 509 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 CD14P08571 375 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 IGFBP1P08833 259 aaPredicted RBP4.87□□□□□ -1.63
AFP-201ENST00000226359 GABRB1P18505 474 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 PCSK6P29122 969 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 GLRXP35754 106 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 MAP2K4P45985 399 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 GPR4P46093 362 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 EVX1P49640 407 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 GDI2P50395 445 aaKnown RBP4.87□□□□□ -1.63
AFP-201ENST00000226359 SNRPGP62308 76 aaKnown RBP4.87□□□□□ -1.63
AFP-201ENST00000226359 SLC35A2P78381 396 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 MRPS34P82930 218 aaKnown RBP4.87□□□□□ -1.63
AFP-201ENST00000226359 SCRN3Q0VDG4 424 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 SNAPC1Q16533 368 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 C12orf73Q69YU5 71 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 RASSF6Q6ZTQ3 369 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 ADCK1Q86TW2 530 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 CPEB3Q8NE35 698 aaKnown RBP4.87□□□□□ -1.63
AFP-201ENST00000226359 OR52L1Q8NGH7 329 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 OR51A7Q8NH64 312 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 C11orf40Q8WZ69 217 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 NSMAFQ92636 917 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 GGHQ92820 318 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 ISOC1Q96CN7 298 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 SAT2Q96F10 170 aaPredicted RBP4.87□□□□□ -1.63
AFP-201ENST00000226359 PLEKHA8Q96JA3 519 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 WACQ9BTA9 647 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 DPCDQ9BVM2 203 aaPredicted RBP4.87□□□□□ -1.63
AFP-201ENST00000226359 SEC61A2Q9H9S3 476 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 SAP30LQ9HAJ7 183 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 ELOVL3Q9HB03 270 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 C20orf141Q9NUB4 165 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 PAK1IP1Q9NWT1 392 aaPredicted RBP4.87□□□□□ -1.63
AFP-201ENST00000226359 PSORS1C1Q9UIG5 152 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 AKAP6Q13023 2319 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 TRAV27A0A087WT01 109 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 LOC390937A0A1W2PQ73 354 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 UNC119BA6NIH7 251 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 M0R129 80 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 RENP00797 406 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 IFNA2P01563 188 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 CDK1P06493 297 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 HTR1AP08908 422 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 MSR1P21757 451 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 PCMT1P22061 227 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 USF1P22415 310 aaPredicted RBP4.87□□□□□ -1.63
AFP-201ENST00000226359 NR4A1P22736 598 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 FPR3P25089 353 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 DCKP27707 260 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 PSMB9P28065 219 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 CALCRP30988 508 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 SLC6A6P31641 620 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 SLC15A1P46059 708 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 CENPAP49450 140 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 TMBIM6P55061 237 aa4.87□□□□□ -1.63
AFP-201ENST00000226359 KLF3P57682 345 aaPredicted RBP4.87□□□□□ -1.63
AFP-201ENST00000226359 EMX1Q04741 257 aaPredicted RBP4.87□□□□□ -1.63
AFP-201ENST00000226359 KRR1Q13601 381 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms