RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 MAP2K3P46734 347 aa12.04□□□□□ -0.48
SEC61B-201ENST00000223641 SPATA46Q5T0L3 261 aa12.04□□□□□ -0.48
SEC61B-201ENST00000223641 SP5Q6BEB4 398 aaPredicted RBP12.04□□□□□ -0.48
SEC61B-201ENST00000223641 ASPHD2Q6ICH7 369 aa12.04□□□□□ -0.48
SEC61B-201ENST00000223641 RGS7BPQ6MZT1 257 aaPredicted RBP12.04□□□□□ -0.48
SEC61B-201ENST00000223641 MRPL21Q7Z2W9 205 aaKnown RBP12.04□□□□□ -0.48
SEC61B-201ENST00000223641 KBTBD8Q8NFY9 601 aa12.04□□□□□ -0.48
SEC61B-201ENST00000223641 CMBLQ96DG6 245 aa12.04□□□□□ -0.48
SEC61B-201ENST00000223641 PIK3IP1Q96FE7 263 aa12.04□□□□□ -0.48
SEC61B-201ENST00000223641 FAM71F1Q96KD3 344 aaPredicted RBP12.04□□□□□ -0.48
SEC61B-201ENST00000223641 PSMG3-AS1Q96PY0 264 aa12.04□□□□□ -0.48
SEC61B-201ENST00000223641 DERL3Q96Q80 235 aa12.04□□□□□ -0.48
SEC61B-201ENST00000223641 OR14A2Q96R54 314 aa12.04□□□□□ -0.48
SEC61B-201ENST00000223641 PPIL3Q9H2H8 161 aaKnown RBP12.04□□□□□ -0.48
SEC61B-201ENST00000223641 TXNL4BQ9NX01 149 aaKnown RBP12.04□□□□□ -0.48
SEC61B-201ENST00000223641 ENPP5Q9UJA9 477 aa12.04□□□□□ -0.48
SEC61B-201ENST00000223641 DHDHQ9UQ10 334 aa12.04□□□□□ -0.48
SEC61B-201ENST00000223641 CEPT1Q9Y6K0 416 aa12.04□□□□□ -0.48
SEC61B-201ENST00000223641 PLCE1Q9P212 2302 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 A0A1B0GWJ7 208 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 DPPA5A6NC42 116 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 A6NHS1 94 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 A6NNC1 897 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 CD300LBA8K4G0 201 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 IQCF6A8MYZ5 107 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 SELEP16581 610 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 MPV17P39210 176 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 RIPPLY1Q0D2K3 151 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 ADIPOQQ15848 244 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 CTF1Q16619 201 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 GPR107Q5VW38 600 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 TMEM42Q69YG0 159 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 ZNF529Q6P280 563 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 PAMR1Q6UXH9 720 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 CEACAM19Q7Z692 300 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 COMMD2Q86X83 199 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 SEMA6DQ8NFY4 1073 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 OR13C3Q8NGS6 347 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 SYNPRQ8TBG9 265 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 RPL3LQ92901 407 aaKnown RBP12.03□□□□□ -0.48
SEC61B-201ENST00000223641 TMEM106AQ96A25 262 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 ADAT3Q96EY9 351 aaPredicted RBP12.03□□□□□ -0.48
SEC61B-201ENST00000223641 NAA50Q9GZZ1 169 aaKnown RBP12.03□□□□□ -0.48
SEC61B-201ENST00000223641 SSR3Q9UNL2 185 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 CMAHPQ9Y471 501 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 ATP23Q9Y6H3 246 aa12.03□□□□□ -0.48
SEC61B-201ENST00000223641 UTP20O75691 2785 aaKnown RBP12.03□□□□□ -0.48
SEC61B-201ENST00000223641 HRNRQ86YZ3 2850 aaPredicted RBP12.02□□□□□ -0.48
SEC61B-201ENST00000223641 RAI1Q7Z5J4 1906 aaPredicted RBP12.02□□□□□ -0.49
SEC61B-201ENST00000223641 SMIM31A0A1B0GVY4 71 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 A0A1W2PPR1 153 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 H3BSH0 61 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 AIREO43918 545 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 ALX3O95076 343 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 CD2P06729 351 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 IGFBP3P17936 291 aaPredicted RBP12.02□□□□□ -0.49
SEC61B-201ENST00000223641 MAPK3P27361 379 aaPredicted RBP12.02□□□□□ -0.49
SEC61B-201ENST00000223641 GCH1P30793 250 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 SOX2P48431 317 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 EVX1P49640 407 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 FABP6P51161 128 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 TMBIM6P55061 237 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 PRSS12P56730 875 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 ZNF672Q499Z4 452 aaPredicted RBP12.02□□□□□ -0.49
SEC61B-201ENST00000223641 OR2T2Q6IF00 324 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 LRP11Q86VZ4 500 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 CLVS1Q8IUQ0 354 aaPredicted RBP12.02□□□□□ -0.49
SEC61B-201ENST00000223641 SERPINA12Q8IW75 414 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 CSNK2A3Q8NEV1 391 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 OR56B2PQ8NGI1 322 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 ZNF420Q8TAQ5 688 aaPredicted RBP12.02□□□□□ -0.49
SEC61B-201ENST00000223641 TSEN15Q8WW01 171 aaKnown RBP12.02□□□□□ -0.49
SEC61B-201ENST00000223641 PP6455Q8WZ26 134 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 NEUROG1Q92886 237 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 MRPL24Q96A35 216 aaKnown RBP12.02□□□□□ -0.49
SEC61B-201ENST00000223641 FGGYQ96C11 551 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 BCL7BQ9BQE9 202 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 CHCHD6Q9BRQ6 235 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 CENPOQ9BU64 300 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 MRPL37Q9BZE1 423 aaKnown RBP12.02□□□□□ -0.49
SEC61B-201ENST00000223641 NOX4Q9NPH5 578 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 BATF3Q9NR55 127 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 NDUFA13Q9P0J0 144 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 PURGQ9UJV8 347 aaKnown RBP12.02□□□□□ -0.49
SEC61B-201ENST00000223641 PIGLQ9Y2B2 252 aa12.02□□□□□ -0.49
SEC61B-201ENST00000223641 ZNF816-ZNF321PA0A0X1KG74 233 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 A1L4Q6 167 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 GGT3PA6NGU5 568 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 ZNF701M0R085 212 aaPredicted RBP12.01□□□□□ -0.49
SEC61B-201ENST00000223641 LILRA1O75019 489 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 ARL6IP5O75915 188 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 CST4P01036 141 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 FAHP16930 419 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 FSTP19883 344 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 APOBEC3AP31941 199 aaPredicted RBP12.01□□□□□ -0.49
SEC61B-201ENST00000223641 ALKBH6Q3KRA9 238 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 FAM27D1Q5T7N8 215 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 UTS2BQ765I0 119 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 RAB2BQ8WUD1 216 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 DHRS9Q9BPW9 319 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms