RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 MTRF1O75570 445 aaKnown RBP23.31■■□□□ 1.32
CHMP4B-201ENST00000217402 SELEP16581 610 aa23.31■■□□□ 1.32
CHMP4B-201ENST00000217402 KITLGP21583 273 aa23.31■■□□□ 1.32
CHMP4B-201ENST00000217402 SYT6Q5T7P8 510 aaPredicted RBP23.31■■□□□ 1.32
CHMP4B-201ENST00000217402 PHC2Q8IXK0 858 aa23.31■■□□□ 1.32
CHMP4B-201ENST00000217402 ZNF611Q8N823 705 aa23.31■■□□□ 1.32
CHMP4B-201ENST00000217402 PLPP7Q8NBV4 271 aa23.31■■□□□ 1.32
CHMP4B-201ENST00000217402 TSEN15Q8WW01 171 aaKnown RBP23.31■■□□□ 1.32
CHMP4B-201ENST00000217402 HECTD1Q9ULT8 2610 aa23.31■■□□□ 1.32
CHMP4B-201ENST00000217402 SOD3P08294 240 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 ALDH3B1P43353 468 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 MAGEB1P43366 347 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 SSX1Q16384 188 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 NKPD1Q17RQ9 610 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 SEMA6DQ8NFY4 1073 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 OR13C3Q8NGS6 347 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 OR14K1Q8NGZ2 314 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 TMEM203Q969S6 136 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 PLEKHA1Q9HB21 404 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 PIGLQ9Y2B2 252 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 V9GYS6 101 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 LOC390937A0A1W2PQ73 354 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 A6NIN4 97 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 IQCF6A8MYZ5 107 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 PRF1P14222 555 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 FAHP16930 419 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 LIPAP38571 399 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 MAP2K3P46734 347 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 EFNB3Q15768 340 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 MST1LQ2TV78 715 aa23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 GTF3AQ92664 365 aaKnown RBP23.3■■□□□ 1.32
CHMP4B-201ENST00000217402 B9A039 149 aa23.29■■□□□ 1.32
CHMP4B-201ENST00000217402 CD1AP06126 327 aa23.29■■□□□ 1.32
CHMP4B-201ENST00000217402 DANCRP0C864 163 aa23.29■■□□□ 1.32
CHMP4B-201ENST00000217402 SOX2P48431 317 aa23.29■■□□□ 1.32
CHMP4B-201ENST00000217402 RPS25P62851 125 aaKnown RBP23.29■■□□□ 1.32
CHMP4B-201ENST00000217402 GPR50Q13585 617 aa23.29■■□□□ 1.32
CHMP4B-201ENST00000217402 YIF1BQ5BJH7 314 aa23.29■■□□□ 1.32
CHMP4B-201ENST00000217402 AGAP6Q5VW22 663 aa23.29■■□□□ 1.32
CHMP4B-201ENST00000217402 GPR148Q8TDV2 347 aa23.29■■□□□ 1.32
CHMP4B-201ENST00000217402 DHDHQ9UQ10 334 aa23.29■■□□□ 1.32
CHMP4B-201ENST00000217402 LAMP3Q9UQV4 416 aa23.29■■□□□ 1.32
CHMP4B-201ENST00000217402 CENPEQ02224 2701 aa23.28■■□□□ 1.32
CHMP4B-201ENST00000217402 LRBAP50851 2863 aa23.28■■□□□ 1.32
CHMP4B-201ENST00000217402 JUNBP17275 347 aaPredicted RBP23.28■■□□□ 1.32
CHMP4B-201ENST00000217402 RPS11P62280 158 aaKnown RBP eCLIP23.28■■□□□ 1.32
CHMP4B-201ENST00000217402 MSL2Q9HCI7 577 aa23.28■■□□□ 1.32
CHMP4B-201ENST00000217402 CELSR2Q9HCU4 2923 aa23.28■■□□□ 1.32
CHMP4B-201ENST00000217402 PLSCR5A0PG75 271 aa23.27■■□□□ 1.32
CHMP4B-201ENST00000217402 CCRL2O00421 344 aa23.27■■□□□ 1.32
CHMP4B-201ENST00000217402 OCM2P0CE71 109 aa23.27■■□□□ 1.32
CHMP4B-201ENST00000217402 ZNF12P17014 697 aa23.27■■□□□ 1.32
CHMP4B-201ENST00000217402 DDOSTP39656 456 aa23.27■■□□□ 1.32
CHMP4B-201ENST00000217402 EVX1P49640 407 aa23.27■■□□□ 1.32
CHMP4B-201ENST00000217402 RIPPLY1Q0D2K3 151 aa23.27■■□□□ 1.32
CHMP4B-201ENST00000217402 OR8G5Q8NG78 346 aa23.27■■□□□ 1.32
CHMP4B-201ENST00000217402 DYNLRB1Q9NP97 96 aa23.27■■□□□ 1.32
CHMP4B-201ENST00000217402 CBLN4Q9NTU7 201 aa23.27■■□□□ 1.32
CHMP4B-201ENST00000217402 NDUFB11Q9NX14 153 aa23.27■■□□□ 1.32
CHMP4B-201ENST00000217402 SCOCQ9UIL1 159 aa23.27■■□□□ 1.32
CHMP4B-201ENST00000217402 RHBDD3Q9Y3P4 386 aa23.27■■□□□ 1.32
CHMP4B-201ENST00000217402 RAI1Q7Z5J4 1906 aaPredicted RBP23.27■■□□□ 1.32
CHMP4B-201ENST00000217402 M0R233 179 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 MMP15P51511 669 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 KRTAP10-9P60411 292 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 SNRPD2P62316 118 aaKnown RBP23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 INSL4Q14641 139 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 SWI5Q1ZZU3 235 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 Q6ZSR3 168 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 CSNK2A3Q8NEV1 391 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 NRGNQ92686 78 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 PAPOLGQ9BWT3 736 aaKnown RBP23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 FBN2P35556 2912 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 ANKRD30BLA7E2S9 258 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 CD8AP01732 235 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 NAT2P11245 290 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 CA6P23280 308 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 MOGQ16653 247 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 C20orf204Q6ZNR8 217 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 Q6ZR03 302 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 DTX2Q86UW9 622 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 FTMTQ8N4E7 242 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 MS4A15Q8N5U1 240 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 CCDC54Q8NEL0 328 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 FGGYQ96C11 551 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 ADAT3Q96EY9 351 aaPredicted RBP23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 OR14A2Q96R54 314 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 PPP1R3EQ9H7J1 279 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 ZNF275Q9NSD4 429 aaPredicted RBP23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 ENPP5Q9UJA9 477 aa23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 SF3B6Q9Y3B4 125 aaKnown RBP23.26■■□□□ 1.31
CHMP4B-201ENST00000217402 ZNF816-ZNF321PA0A0X1KG74 233 aa23.25■■□□□ 1.31
CHMP4B-201ENST00000217402 ZSCAN5BA6NJL1 495 aa23.25■■□□□ 1.31
CHMP4B-201ENST00000217402 ZNF20P17024 532 aa23.25■■□□□ 1.31
CHMP4B-201ENST00000217402 GABRA5P31644 462 aa23.25■■□□□ 1.31
CHMP4B-201ENST00000217402 PIGCQ92535 297 aa23.25■■□□□ 1.31
CHMP4B-201ENST00000217402 DVL3Q92997 716 aaPredicted RBP23.25■■□□□ 1.31
CHMP4B-201ENST00000217402 TRAF4Q9BUZ4 470 aaPredicted RBP23.25■■□□□ 1.31
CHMP4B-201ENST00000217402 LIME1Q9H400 295 aa23.25■■□□□ 1.31
CHMP4B-201ENST00000217402 MRPL15Q9P015 296 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms