RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 SIGLEC7Q9Y286 467 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 DCTN6O00399 190 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 ANGPTL7O43827 346 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 OR7C2O60412 319 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 NME1P15531 152 aaKnown RBP12.22□□□□□ -0.45
SF3A1-201ENST00000215793 F2RP25116 425 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 BAMBIQ13145 260 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 SLC17A5Q9NRA2 495 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 KLK11Q9UBX7 282 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 IL5P05113 134 aa12.21□□□□□ -0.45
SF3A1-201ENST00000215793 FAHP16930 419 aa12.21□□□□□ -0.45
SF3A1-201ENST00000215793 FUT3P21217 361 aa12.21□□□□□ -0.45
SF3A1-201ENST00000215793 ST8SIA4Q92187 359 aa12.21□□□□□ -0.45
SF3A1-201ENST00000215793 PINX1Q96BK5 328 aaKnown RBP12.21□□□□□ -0.45
SF3A1-201ENST00000215793 GALMQ96C23 342 aa12.21□□□□□ -0.45
SF3A1-201ENST00000215793 EDEM2Q9BV94 578 aa12.21□□□□□ -0.45
SF3A1-201ENST00000215793 CCDC187A0A096LP49 1063 aa12.21□□□□□ -0.45
SF3A1-201ENST00000215793 XKRY2A2RUG3 117 aa12.21□□□□□ -0.45
SF3A1-201ENST00000215793 CHEK1O14757 476 aa12.21□□□□□ -0.45
SF3A1-201ENST00000215793 GNB1P62873 340 aa12.21□□□□□ -0.45
SF3A1-201ENST00000215793 EXOSC2Q13868 293 aaKnown RBP12.21□□□□□ -0.45
SF3A1-201ENST00000215793 SLC25A35Q3KQZ1 300 aa12.21□□□□□ -0.45
SF3A1-201ENST00000215793 ABI3BPQ7Z7G0 1075 aa12.21□□□□□ -0.45
SF3A1-201ENST00000215793 CCDC190Q86UF4 302 aa12.21□□□□□ -0.45
SF3A1-201ENST00000215793 OR5AP2Q8NGF4 316 aa12.21□□□□□ -0.45
SF3A1-201ENST00000215793 KISS1RQ969F8 398 aaPredicted RBP12.21□□□□□ -0.45
SF3A1-201ENST00000215793 TMEFF2Q9UIK5 374 aaPredicted RBP12.21□□□□□ -0.45
SF3A1-201ENST00000215793 PPM1DO15297 605 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 HRO43593 1189 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 CTRB1P17538 263 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 CTRB2Q6GPI1 263 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 DRAM2Q6UX65 266 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 SLC38A6Q8IZM9 456 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 ZFP62Q8NB50 900 aaPredicted RBP12.21□□□□□ -0.46
SF3A1-201ENST00000215793 OR4S1Q8NGB4 309 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 OR10G3Q8NGC4 313 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.21□□□□□ -0.46
SF3A1-201ENST00000215793 SLC39A7Q92504 469 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 LURAP1Q96LR2 239 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 ALKBH3Q96Q83 286 aaPredicted RBP12.21□□□□□ -0.46
SF3A1-201ENST00000215793 RHNO1Q9BSD3 238 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 CHRDL1Q9BU40 450 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 ZNF385DQ9H6B1 395 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 H0Y8G0 127 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 RRASP10301 218 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 ABCD3P28288 659 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 TRA2AQ13595 282 aaKnown RBP eCLIP12.21□□□□□ -0.46
SF3A1-201ENST00000215793 CTF1Q16619 201 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 FAM27D1Q5T7N8 215 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 Q8IYB0 196 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 CADM4Q8NFZ8 388 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 OR1F12Q8NHA8 337 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 ROBO4Q8WZ75 1007 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 KTI12Q96EK9 354 aaPredicted RBP12.21□□□□□ -0.46
SF3A1-201ENST00000215793 TVP23CQ96ET8 276 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 TAAR9Q96RI9 348 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 SMIM7Q9BQ49 75 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 LRP12Q9Y561 859 aa12.21□□□□□ -0.46
SF3A1-201ENST00000215793 TPRP12270 2363 aaKnown RBP12.2□□□□□ -0.46
SF3A1-201ENST00000215793 C2CD4DB7Z1M9 353 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 IAPPP10997 89 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 PLA1AQ53H76 456 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 FOXB2Q5VYV0 432 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 DEGS2Q6QHC5 323 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 DEFB123Q8N688 67 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 OR11G2Q8NGC1 345 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 HGDQ93099 445 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 OR51I2Q9H344 312 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 KCNE3Q9Y6H6 103 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 GPR31O00270 319 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 PIAS2O75928 621 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 H3F3AP84243 136 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 NKG7Q16617 165 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 RGS7BPQ6MZT1 257 aaPredicted RBP12.2□□□□□ -0.46
SF3A1-201ENST00000215793 TCTE3Q8IZS6 198 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 GPR119Q8TDV5 335 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 RPUSD4Q96CM3 377 aaKnown RBP12.2□□□□□ -0.46
SF3A1-201ENST00000215793 WDR89Q96FK6 387 aaPredicted RBP12.2□□□□□ -0.46
SF3A1-201ENST00000215793 CABLES2Q9BTV7 478 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 NIT2Q9NQR4 276 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 TRAPPC4Q9Y296 219 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 V9GYS6 101 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 ST8SIA5O15466 376 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 AQP8O94778 261 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 DEFB109BQ30KR1 87 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 SPNS2Q8IVW8 549 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 AKR7LQ8NHP1 331 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 ST8SIA2Q92186 375 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 FAM173AQ9BQD7 235 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 SLC35D1Q9NTN3 355 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 CLEC18AA5D8T8 446 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 BCL2L11O43521 198 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 CDK5Q00535 292 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 KIAA0040Q15053 153 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 LINC00303Q3SY05 128 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 RELL2Q8NC24 303 aaPredicted RBP12.2□□□□□ -0.46
SF3A1-201ENST00000215793 CLEC18CQ8NCF0 446 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 TMEM104Q8NE00 496 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 GPR32P1Q8NGA4 272 aa12.2□□□□□ -0.46
SF3A1-201ENST00000215793 CROCCQ5TZA2 2017 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms