RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 TIMM8AO60220 97 aaPredicted RBP13.69□□□□□ -0.22
CLN6-216ENST00000636876 TTRP02766 147 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 MT-ND2P03891 347 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 RAF1P04049 648 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 HTR1AP08908 422 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 CFL1P23528 166 aaKnown RBP13.69□□□□□ -0.22
CLN6-216ENST00000636876 GBX2P52951 348 aaPredicted RBP13.69□□□□□ -0.22
CLN6-216ENST00000636876 GABARAPL2P60520 117 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 MRPL28Q13084 256 aaKnown RBP13.69□□□□□ -0.22
CLN6-216ENST00000636876 IRF3Q14653 427 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 MOGQ16653 247 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 GFOD2Q3B7J2 385 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 OR2T2Q6IF00 324 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 ELMOD2Q8IZ81 293 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 ZNF485Q8NCK3 441 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 OR2G2Q8NGZ5 317 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 HAVCR2Q8TDQ0 301 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 SPRYD4Q8WW59 207 aaPredicted RBP13.69□□□□□ -0.22
CLN6-216ENST00000636876 PPP1R14AQ96A00 147 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 REEP6Q96HR9 211 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 TAAR3PQ9P1P4 343 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 GPR160Q9UJ42 338 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 ZNF391Q9UJN7 358 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 SLC22A13Q9Y226 551 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 PLEKHA6Q9Y2H5 1048 aa13.69□□□□□ -0.22
CLN6-216ENST00000636876 hCG_38984A0A1B0GV85 526 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 E9PI62 339 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 OVOL3O00110 214 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 MYL12BO14950 172 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 SELEP16581 610 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 EEF1B2P24534 225 aaKnown RBP13.68□□□□□ -0.22
CLN6-216ENST00000636876 KIR3DL2P43630 455 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 PRSS12P56730 875 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 NKPD1Q17RQ9 610 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 ALKBH6Q3KRA9 238 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 WDR38Q5JTN6 314 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 PRSS48Q7RTY5 328 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 PRSS35Q8N3Z0 413 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 NANOGP1Q8N7R0 232 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 OR51E1Q8TCB6 317 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 LYZL4Q96KX0 146 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 FBXO9Q9UK97 447 aaPredicted RBP13.68□□□□□ -0.22
CLN6-216ENST00000636876 ERGIC3Q9Y282 383 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 LRCH1Q9Y2L9 728 aa13.68□□□□□ -0.22
CLN6-216ENST00000636876 OTOGQ6ZRI0 2925 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 MAP1AP78559 2803 aaPredicted RBP13.67□□□□□ -0.22
CLN6-216ENST00000636876 GGT3PA6NGU5 568 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 CD300LBA8K4G0 201 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 IQCF6A8MYZ5 107 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 M0R233 179 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 IGLV3-1P01715 115 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 BMP4P12644 408 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 DNASE1P24855 282 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 ALDH3B1P43353 468 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 TGM4P49221 684 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 PPOXP50336 477 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 CCR9P51686 369 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 WNT4P56705 351 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 NANOS3P60323 173 aaKnown RBP13.67□□□□□ -0.22
CLN6-216ENST00000636876 FAM3AP98173 230 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 ALKBH1Q13686 389 aaKnown RBP13.67□□□□□ -0.22
CLN6-216ENST00000636876 KLBQ86Z14 1044 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 GATAD2BQ8WXI9 593 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 PIGTQ969N2 578 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 MND1Q9BWT6 205 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 CACNG6Q9BXT2 260 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 CCDC90BQ9GZT6 254 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 CXorf56Q9H5V9 222 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 DYNLRB1Q9NP97 96 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 GPR84Q9NQS5 396 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 BABAM2Q9NXR7 383 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 FRRS1LQ9P0K9 344 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 CGGBP1Q9UFW8 167 aaPredicted RBP13.67□□□□□ -0.22
CLN6-216ENST00000636876 PMF1-BGLAPU3KQ54 211 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 CCDC168Q8NDH2 2452 aa13.67□□□□□ -0.22
CLN6-216ENST00000636876 P2RY10O00398 339 aa13.66□□□□□ -0.22
CLN6-216ENST00000636876 MRPS14O60783 128 aaKnown RBP13.66□□□□□ -0.22
CLN6-216ENST00000636876 GSK3AP49840 483 aa13.66□□□□□ -0.22
CLN6-216ENST00000636876 MMP15P51511 669 aa13.66□□□□□ -0.22
CLN6-216ENST00000636876 CDH24Q86UP0 819 aa13.66□□□□□ -0.22
CLN6-216ENST00000636876 COMMD2Q86X83 199 aa13.66□□□□□ -0.22
CLN6-216ENST00000636876 OR5AS1Q8N127 324 aa13.66□□□□□ -0.22
CLN6-216ENST00000636876 OR56B2PQ8NGI1 322 aa13.66□□□□□ -0.22
CLN6-216ENST00000636876 GTF3AQ92664 365 aaKnown RBP13.66□□□□□ -0.22
CLN6-216ENST00000636876 SOX7Q9BT81 388 aa13.66□□□□□ -0.22
CLN6-216ENST00000636876 CYSLTR2Q9NS75 346 aa13.66□□□□□ -0.22
CLN6-216ENST00000636876 LSM2Q9Y333 95 aaKnown RBP13.66□□□□□ -0.22
CLN6-216ENST00000636876 ARID1AO14497 2285 aa13.66□□□□□ -0.22
CLN6-216ENST00000636876 MED13LQ71F56 2210 aa13.66□□□□□ -0.22
CLN6-216ENST00000636876 A0A1B0GTI1 187 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 LOC390937A0A1W2PQ73 354 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 PLSCR5A0PG75 271 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 OR4C45A6NMZ5 311 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 H7C417 338 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 LILRA1O75019 489 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 LALBAP00709 142 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 UBCP0CG48 685 aaKnown RBP13.65□□□□□ -0.22
CLN6-216ENST00000636876 ATP6V1B1P15313 513 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 LIPAP38571 399 aa13.65□□□□□ -0.22
CLN6-216ENST00000636876 CDKN1AP38936 164 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms