RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-240	ENST00000635392	FBXW4	P57775	412 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SELENOT	P62341	195 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	FZD2	Q14332	565 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	RCN1	Q15293	331 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	HENMT1	Q5T8I9	393 aa	Known RBP	4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	RAET1L	Q5VY80	246 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CERS6	Q6ZMG9	384 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ZNF546	Q86UE3	836 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ERI1	Q8IV48	349 aa	Known RBP	4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PRELID2	Q8N945	189 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ZNF740	Q8NDX6	193 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	OR7G2	Q8NG99	324 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	OR4C6	Q8NH72	309 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	BLOC1S5	Q8TDH9	187 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ACMSD	Q8TDX5	336 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TCEAL3	Q969E4	200 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	DCUN1D1	Q96GG9	259 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TMEM246	Q9BRR3	403 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	RIOK2	Q9BVS4	552 aa	Known RBP	4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	YTHDF1	Q9BYJ9	559 aa	Known RBP	4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	QPCTL	Q9NXS2	382 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	IL17C	Q9P0M4	197 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PCYOX1	Q9UHG3	505 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ASF1A	Q9Y294	204 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SLC17A4	Q9Y2C5	497 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	EML5	Q05BV3	1969 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CEP192	Q8TEP8	1941 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	NYNRIN	Q9P2P1	1898 aa	Known RBP	4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SHROOM3	Q8TF72	1996 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CCL21	O00585	134 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	DLGAP1	O14490	977 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	RAD51B	O15315	384 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CDK14	O94921	469 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TTC4	O95801	387 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	IGKV3-15	P01624	115 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ABO	P16442	354 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	GAL	P22466	123 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	COX7A1	P24310	79 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	RPL22	P35268	128 aa	Known RBP	4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TFPI2	P48307	235 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	BASP1	P80723	227 aa	Known RBP	4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	NDP	Q00604	133 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	DR1	Q01658	176 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CAV1	Q03135	178 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ITIH4	Q14624	930 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ATP6AP1	Q15904	470 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	WHAMMP3	Q1A5X7	153 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ALKBH6	Q3KRA9	238 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CTRB2	Q6GPI1	263 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TRIM40	Q6P9F5	258 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392		Q6ZN92	141 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ZNF620	Q6ZNG0	422 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SNX20	Q7Z614	316 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	LRRC6	Q86X45	466 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PDIK1L	Q8N165	341 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	FNDC5	Q8NAU1	212 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	LMX1A	Q8TE12	382 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	MARC2	Q969Z3	335 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	LRRC39	Q96DD0	335 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	COX14	Q96I36	57 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	OR2M4	Q96R27	311 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SORT1	Q99523	831 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TIMM29	Q9BSF4	260 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TMEM59	Q9BXS4	323 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	POLR2J2	Q9GZM3	115 aa	Known RBP	4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ILKAP	Q9H0C8	392 aa	Predicted RBP	4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	POLR2J3	Q9H1A7	115 aa	Known RBP	4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ASB8	Q9H765	288 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	MRM3	Q9HC36	420 aa	Known RBP	4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	NEK6	Q9HC98	313 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	NLE1	Q9NVX2	485 aa	Predicted RBP	4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PYCARD	Q9ULZ3	195 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	UTP11	Q9Y3A2	253 aa	Known RBP	4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	N6AMT1	Q9Y5N5	214 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	MMP24	Q9Y5R2	645 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PCNX2	A6NKB5	2137 aa		4.22	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KNTC1	P50748	2209 aa		4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	ASCC3	Q8N3C0	2202 aa	Known RBP	4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	CACNA1A	O00555	2505 aa		4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392		A0A075B6Q4	140 aa		4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	RBMY1B	A6NDE4	496 aa	Known RBP	4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	RBMY1E	A6NEQ0	496 aa	Known RBP	4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	C12orf77	C9JDV5	145 aa		4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	AGPAT2	O15120	278 aa		4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	HDAC3	O15379	428 aa		4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	WBP4	O75554	376 aa	Known RBP	4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	MMP23A	O75900	390 aa		4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	SRP72	O76094	671 aa	Known RBP	4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	SUPT7L	O94864	414 aa		4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	TSPAN13	O95857	204 aa		4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	LY6G6D	O95868	133 aa		4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	FTH1	P02794	183 aa		4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	KRTAP1-4	P0C5Y4	121 aa		4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	RBMY1D	P0C7P1	496 aa	Known RBP	4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	OR56A5	P0C7T3	313 aa		4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	RBMY1A1	P0DJD3	496 aa	Known RBP	4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	ZNF7	P17097	686 aa	Predicted RBP	4.21	□□□□□ -1.74
SMARCA2-240	ENST00000635392	PRDX3	P30048	256 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms