RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 NUDT10Q8NFP7 164 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 CPT1CQ8TCG5 803 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 LHX4Q969G2 390 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 ATF6BQ99941 703 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 TUBD1Q9UJT1 453 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 PLRG1O43660 514 aaKnown RBP2.79□□□□□ -1.96
NEB-220ENST00000618972 C8AP07357 584 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 SOD3P08294 240 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 SAXO2Q658L1 398 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 SLC26A10Q8NG04 563 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 FAM3CQ92520 227 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 PLD4Q96BZ4 506 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 PRR13Q9NZ81 148 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 COL1A2P08123 1366 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 MBLAC1A4D2B0 266 aaPredicted RBP2.79□□□□□ -1.96
NEB-220ENST00000618972 DHRS7CA6NNS2 312 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 ZNF44P15621 663 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 HNRNPA1L2Q32P51 320 aaKnown RBP2.79□□□□□ -1.96
NEB-220ENST00000618972 PLPPR5Q32ZL2 321 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 ELFN2Q5R3F8 820 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 PARP12Q9H0J9 701 aaKnown RBP2.79□□□□□ -1.96
NEB-220ENST00000618972 NDOR1Q9UHB4 597 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 NEU3Q9UQ49 428 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 WNT6Q9Y6F9 365 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 ZNF593O00488 134 aaPredicted RBP2.79□□□□□ -1.96
NEB-220ENST00000618972 PPP1R17O96001 155 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 UQCRFS1P47985 274 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 STARD6P59095 220 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 NHLH1Q02575 133 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 TLE1Q04724 770 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 PHF19Q5T6S3 580 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 APCDD1LQ8NCL9 501 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 BOD1Q96IK1 185 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 SLC26A1Q9H2B4 701 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 POFUT1Q9H488 388 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 KIR3DX1Q9H7L2 352 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 WFDC1Q9HC57 220 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 MRPS16Q9Y3D3 137 aaKnown RBP2.79□□□□□ -1.96
NEB-220ENST00000618972 WIPI2Q9Y4P8 454 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 FAM221AA4D161 298 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 DEGS1O15121 323 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 SERPINA2P20848 420 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 IL24Q13007 206 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 FCRL6Q6DN72 434 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 RNF144BQ7Z419 303 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 CAMKMTQ7Z624 323 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 NIT1Q86X76 327 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 ZCCHC14Q8WYQ9 949 aaKnown RBP2.79□□□□□ -1.96
NEB-220ENST00000618972 TOX2Q96NM4 488 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 NMES1Q9C002 83 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 LAMTOR3Q9UHA4 124 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 ARL2-SNX15V9GYD0 113 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 ZNF205O95201 554 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 TBXA2RP21731 343 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 MSX1P28360 303 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 CIRBPQ14011 172 aaKnown RBP2.79□□□□□ -1.96
NEB-220ENST00000618972 KIAA0895LQ68EN5 471 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 USP50Q70EL3 339 aaPredicted RBP2.79□□□□□ -1.96
NEB-220ENST00000618972 NUDT13Q86X67 352 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 EXD3Q8N9H8 876 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 GPR137Q96N19 417 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 RSG1Q9BU20 258 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 WASHC3Q9Y3C0 194 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 CXorf51AA0A1B0GTR3 108 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 LINC00869P0C866 280 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 ERVK-16P61578 105 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 GPM6BQ13491 265 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 ATXN7L3Q14CW9 347 aaPredicted RBP2.79□□□□□ -1.96
NEB-220ENST00000618972 TFAP2EQ6VUC0 442 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 FBXW12Q6X9E4 464 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 SLC25A42Q86VD7 318 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 MYOZ3Q8TDC0 251 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 DEC1Q9P2X7 70 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 SLIT1O75093 1534 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 NFAT5O94916 1531 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 A0A0B4J2A0 478 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 DPRXA6NFQ7 191 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 ZNF468Q5VIY5 522 aaPredicted RBP2.79□□□□□ -1.96
NEB-220ENST00000618972 LINC01599Q8WXQ3 324 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 DCBLD2Q96PD2 775 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 SHPKQ9UHJ6 478 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 ZNF256Q9Y2P7 627 aaPredicted RBP2.79□□□□□ -1.96
NEB-220ENST00000618972 SERTM1A2A2V5 107 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 OR2M5A3KFT3 312 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 PSMB5P28074 263 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 CHRNB4P30926 498 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 TRHRP34981 398 aaPredicted RBP2.79□□□□□ -1.96
NEB-220ENST00000618972 LRRTM1Q86UE6 522 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 CMTM2Q8TAZ6 248 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 ADAMTS18Q8TE60 1221 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 ZMYND19Q96E35 227 aaPredicted RBP2.79□□□□□ -1.96
NEB-220ENST00000618972 BORCS8Q96FH0 119 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 HRASLSQ9HDD0 168 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 VDAC3Q9Y277 283 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 ZGRF1Q86YA3 2104 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 ZNF264O43296 627 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 EIF3GO75821 320 aaKnown RBP eCLIP2.79□□□□□ -1.96
NEB-220ENST00000618972 LIM2P55344 173 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 TMEM107Q6UX40 140 aa2.79□□□□□ -1.96
NEB-220ENST00000618972 CMTM4Q8IZR5 234 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms