RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 GLIPR1L1Q6UWM5 242 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 OR4A4PQ8NGN8 299 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 NUDT16L1Q9BRJ7 211 aaKnown RBP18.09■□□□□ 0.49
NEK3-208ENST00000618534 TMEM231Q9H6L2 316 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 SUSD2Q9UGT4 822 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 MPIG6BO95866 241 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 ABOP16442 354 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 ZNF20P17024 532 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 PI3P19957 117 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 ARL4DP49703 201 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 FBXW4P57775 412 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 FOXK1P85037 733 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 NAAAQ02083 359 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 SGCAQ16586 387 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 PNLIPRP3Q17RR3 467 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 OR6S1Q8NH40 331 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 RNF141Q8WVD5 230 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 MRPS28Q9Y2Q9 187 aaKnown RBP18.09■□□□□ 0.49
NEK3-208ENST00000618534 FER1L5A0AVI2 2057 aa18.09■□□□□ 0.49
NEK3-208ENST00000618534 ANKUB1A6NFN9 424 aa18.08■□□□□ 0.49
NEK3-208ENST00000618534 H3BML4 177 aa18.08■□□□□ 0.49
NEK3-208ENST00000618534 ZNF354AO60765 605 aaPredicted RBP18.08■□□□□ 0.49
NEK3-208ENST00000618534 FAM219AQ8IW50 185 aa18.08■□□□□ 0.49
NEK3-208ENST00000618534 TMEM41AQ96HV5 264 aa18.08■□□□□ 0.49
NEK3-208ENST00000618534 TLNRD1Q9H1K6 362 aa18.08■□□□□ 0.49
NEK3-208ENST00000618534 BANF2Q9H503 90 aa18.08■□□□□ 0.49
NEK3-208ENST00000618534 MLXQ9UH92 298 aa18.08■□□□□ 0.49
NEK3-208ENST00000618534 SLC2A1P11166 492 aa18.08■□□□□ 0.48
NEK3-208ENST00000618534 OR3A4PP47883 348 aa18.08■□□□□ 0.48
NEK3-208ENST00000618534 CYCSP99999 105 aaKnown RBP18.08■□□□□ 0.48
NEK3-208ENST00000618534 FOXF1Q12946 379 aa18.08■□□□□ 0.48
NEK3-208ENST00000618534 CLEC18BQ6UXF7 455 aa18.08■□□□□ 0.48
NEK3-208ENST00000618534 C17orf82Q86X59 251 aaPredicted RBP18.08■□□□□ 0.48
NEK3-208ENST00000618534 COMMD2Q86X83 199 aa18.08■□□□□ 0.48
NEK3-208ENST00000618534 THAP3Q8WTV1 239 aaPredicted RBP18.08■□□□□ 0.48
NEK3-208ENST00000618534 ST8SIA1Q92185 356 aa18.08■□□□□ 0.48
NEK3-208ENST00000618534 RAB3CQ96E17 227 aa18.08■□□□□ 0.48
NEK3-208ENST00000618534 C1orf147Q96MC9 270 aaPredicted RBP18.08■□□□□ 0.48
NEK3-208ENST00000618534 TPSD1Q9BZJ3 242 aa18.08■□□□□ 0.48
NEK3-208ENST00000618534 OR5AC2Q9NZP5 309 aa18.08■□□□□ 0.48
NEK3-208ENST00000618534 GPR132Q9UNW8 380 aa18.08■□□□□ 0.48
NEK3-208ENST00000618534 MYO15AQ9UKN7 3530 aa18.08■□□□□ 0.48
NEK3-208ENST00000618534 A0A1W2PP11 408 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 NPIPB13A6NJU9 1138 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 NPIPB4C9JG80 1138 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 RAD51DO75771 328 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 GLULP15104 373 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 HIST1H1DP16402 221 aaKnown RBP18.07■□□□□ 0.48
NEK3-208ENST00000618534 ANOS1P23352 680 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 HSD11B2P80365 405 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 C10orf91Q5T1B1 145 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 H3F3CQ6NXT2 135 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 OR5AS1Q8N127 324 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 MESP1Q9BRJ9 268 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 ANAPC10Q9UM13 185 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 CARHSP1Q9Y2V2 147 aaKnown RBP18.07■□□□□ 0.48
NEK3-208ENST00000618534 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 SFT2D2O95562 160 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 CHRM2P08172 466 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 FAM157CP0CG43 387 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 FOLR1P15328 257 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 PVALBP20472 110 aaPredicted RBP18.07■□□□□ 0.48
NEK3-208ENST00000618534 OR1D5P58170 312 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 GPR85P60893 370 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 RNF4P78317 190 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 VAX1Q5SQQ9 334 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 SHEQ5VZ18 495 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 CNTNAP3BQ96NU0 1288 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 CDC6Q99741 560 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 TREM1Q9NP99 234 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 FLVCR1Q9Y5Y0 555 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 LHFPL6Q9Y693 200 aa18.07■□□□□ 0.48
NEK3-208ENST00000618534 RHPN2P1A8MT19 583 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 CDC14BO60729 498 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 MST1LQ2TV78 715 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 MISPQ8IVT2 679 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 SERINC1Q9NRX5 453 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 LHX6Q9UPM6 363 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 TRIOO75962 3097 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 GSTP1P09211 210 aaKnown RBP18.06■□□□□ 0.48
NEK3-208ENST00000618534 LAP3P28838 519 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 APOBEC1P41238 236 aaKnown RBP18.06■□□□□ 0.48
NEK3-208ENST00000618534 TMEM50BP56557 158 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 SUPT4H1P63272 117 aaKnown RBP18.06■□□□□ 0.48
NEK3-208ENST00000618534 SMAD2Q15796 467 aaKnown RBP18.06■□□□□ 0.48
NEK3-208ENST00000618534 ZNF585AQ6P3V2 769 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 ABHD12BQ7Z5M8 362 aaPredicted RBP18.06■□□□□ 0.48
NEK3-208ENST00000618534 NAA40Q86UY6 237 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 ARRDC1Q8N5I2 433 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 DDIT4LQ96D03 193 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 RAB33BQ9H082 229 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 RAB18Q9NP72 206 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 MMP26Q9NRE1 261 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 KLHL13Q9P2N7 655 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 POLR1DQ9Y2S0 133 aa18.06■□□□□ 0.48
NEK3-208ENST00000618534 ASXL3Q9C0F0 2248 aa18.05■□□□□ 0.48
NEK3-208ENST00000618534 LIPT2A6NK58 231 aa18.05■□□□□ 0.48
NEK3-208ENST00000618534 ZNF705EA8MWA4 302 aaPredicted RBP18.05■□□□□ 0.48
NEK3-208ENST00000618534 NPBWR1P48145 328 aa18.05■□□□□ 0.48
NEK3-208ENST00000618534 ANKRD55Q3KP44 614 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms