RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 RASL12Q9NYN1 266 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 ONECUT1Q9UBC0 465 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 CD300AQ9UGN4 299 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 TMA7Q9Y2S6 64 aaKnown RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 NDUFAF1Q9Y375 327 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 PCDHGB5Q9Y5G0 923 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 SIRT4Q9Y6E7 314 aaPredicted RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 M0QZK8 103 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 CLIC1O00299 241 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 SCG5P05408 212 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 ACAA1P09110 424 aaPredicted RBP3.67□□□□□ -1.82
SNCA-213ENST00000618500 PGA5P0DJD9 388 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 MXRA7P84157 204 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 HOXC5Q00444 222 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 NFYCQ13952 458 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 SCARB2Q14108 478 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 SLC36A3Q495N2 470 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 WDR38Q5JTN6 314 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 GPR139Q6DWJ6 353 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 FAM122BQ7Z309 247 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 LYPD6Q86Y78 171 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 C11orf53Q8IXP5 236 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 MNS1Q8NEH6 495 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 GJC3Q8NFK1 279 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 GPR32P1Q8NGA4 272 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 OR52H1Q8NGJ2 320 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 OR51G2Q8NGK0 314 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 NFKBIDQ8NI38 313 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 GAFA1Q96PS6 74 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 ROPN1BQ9BZX4 212 aaPredicted RBP3.67□□□□□ -1.82
SNCA-213ENST00000618500 MUC13Q9H3R2 512 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 ROPN1Q9HAT0 212 aaPredicted RBP3.67□□□□□ -1.82
SNCA-213ENST00000618500 EDA2RQ9HAV5 297 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 MEIOCA2RUB1 952 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 WDR91A4D1P6 747 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 C17orf98A8MV24 154 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.67□□□□□ -1.82
SNCA-213ENST00000618500 TPST1O60507 370 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 KHDRBS3O75525 346 aaKnown RBP3.67□□□□□ -1.82
SNCA-213ENST00000618500 FUT1P19526 365 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 GGT2P36268 569 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 GSK3BP49841 420 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 ENTPD1P49961 510 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 RPL23AP62750 156 aaKnown RBP3.67□□□□□ -1.82
SNCA-213ENST00000618500 PRKCDQ05655 676 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 FMODQ06828 376 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 ALG10Q5BKT4 473 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 OR2T2Q6IF00 324 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 SMARCD3Q6STE5 483 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 NUDCD3Q8IVD9 361 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 RNF113BQ8IZP6 322 aaKnown RBP3.67□□□□□ -1.82
SNCA-213ENST00000618500 OSR2Q8N2R0 312 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 TCP10LQ8TDR4 215 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 MYDGFQ969H8 173 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 SDSLQ96GA7 329 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 ANKRD19PQ9H560 264 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 SLC7A7Q9UM01 511 aa3.67□□□□□ -1.82
SNCA-213ENST00000618500 DNAH10Q8IVF4 4471 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 TCRBV4S1A1TA0A5B7 111 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 LRRN3E7EW58 273 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 GHRHP01286 108 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 GYPAP02724 150 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 CCDC159P0C7I6 412 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 BMXP51813 675 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 SLC25A1P53007 311 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 DLX6P56179 175 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 TRAP1Q12931 704 aaKnown RBP3.66□□□□□ -1.82
SNCA-213ENST00000618500 GK2Q14410 553 aaPredicted RBP3.66□□□□□ -1.82
SNCA-213ENST00000618500 OR8B8Q15620 311 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 MICBQ29980 383 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 FGD3Q5JSP0 725 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 ZNF770Q6IQ21 691 aaPredicted RBP3.66□□□□□ -1.82
SNCA-213ENST00000618500 DNM1P34Q6PK57 102 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 MSRB3Q8IXL7 192 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 ZNF781Q8N8C0 355 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 OR5AU1Q8NGC0 362 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 OR9Q1Q8NGQ5 310 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 ST8SIA4Q92187 359 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 ANAPC16Q96DE5 110 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 RCHY1Q96PM5 261 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 MMADHCQ9H3L0 296 aaPredicted RBP3.66□□□□□ -1.82
SNCA-213ENST00000618500 PNRC2Q9NPJ4 139 aaKnown RBP3.66□□□□□ -1.82
SNCA-213ENST00000618500 C1orf123Q9NWV4 160 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 VNN3Q9NY84 501 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 ZNF222Q9UK12 451 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 NOTCH1P46531 2555 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 hCG_1809904A0A1W2PP81 198 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 A0A1W2PPE2 198 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 A0A1W2PPL8 197 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 A0A1W2PR64 198 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 A0A1W2PRV1 198 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 PRSS37A4D1T9 235 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 ANP32DO95626 131 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 IGHV1-8P0DP01 117 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 AQP2P41181 271 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 POLR2JP52435 117 aaKnown RBP3.66□□□□□ -1.82
SNCA-213ENST00000618500 RSPO1Q2MKA7 263 aaPredicted RBP3.66□□□□□ -1.82
SNCA-213ENST00000618500 PRAMEF6Q5VXH4 476 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 ZNF626Q68DY1 528 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 ZBTB49Q6ZSB9 765 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms