RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 TMEM178BH3BS89 294 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 ZNF254O75437 659 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 IGHV2-70P01814 119 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 IGHV2-5P01817 119 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 HLA-DPB1P04440 258 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 ALPLP05186 524 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 MSMBP08118 114 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 FAM157CP0CG43 387 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 CPT2P23786 658 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 POLR2IP36954 125 aaKnown RBP13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 ZNF121P58317 390 aaPredicted RBP13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 FAM3AP98173 230 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 ROM1Q03395 351 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 TMEM155Q4W5P6 130 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 SPERTQ8NA61 448 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 OR51F2Q8NH61 342 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 ASB17Q8WXJ9 295 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 MNTQ99583 582 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 DCAF16Q9NXF7 216 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 ZNF319Q9P2F9 582 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 ZNF391Q9UJN7 358 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 SVEP1Q4LDE5 3571 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 TRAV20A0A0B4J274 112 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 SAC3D1A6NKF1 404 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 ANXA2P07355 339 aaKnown RBP13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 HNF1AP20823 631 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 CA6P23280 308 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 THBS2P35442 1172 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 MMP16P51512 607 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 HCCSP53701 268 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 RAD23AP54725 363 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 PRSS12P56730 875 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 OR8G1Q15617 311 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 FAM57BQ71RH2 274 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 GLCCI1Q86VQ1 547 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 GID4Q8IVV7 300 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 OR8J1Q8NGP2 316 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 Q8TCH9 128 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 TRUB1Q8WWH5 349 aaKnown RBP13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 TMEM186Q96B77 213 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 IL4I1Q96RQ9 567 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 GAL3ST1Q99999 423 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 OR10A2Q9H208 303 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 KLHDC2Q9Y2U9 406 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 N6AMT1Q9Y5N5 214 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 DOCK11Q5JSL3 2073 aa13.03□□□□□ -0.32
SRGAP2C-205ENST00000617209 LRRC30A6NM36 301 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 E9PQ18 207 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 TBX1O43435 398 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 IFNA2P01563 188 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 SBK2P0C263 348 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 ALDH3A2P51648 485 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 PSMA6P60900 246 aaKnown RBP13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 BTG1P62324 171 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 TMED1Q13445 227 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 SNCBQ16143 134 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 TIGD6Q17RP2 521 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 CR1LQ2VPA4 569 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 LRRN1Q6UXK5 716 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 BCDIN3DQ7Z5W3 292 aaKnown RBP13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 KRT77Q7Z794 578 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 ZNF679Q8IYX0 411 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 C1orf87Q8N0U7 546 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 SPICQ8N5J4 248 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 REEP6Q96HR9 211 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 PGAM5Q96HS1 289 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 HRASLS5Q96KN8 279 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 CNN2Q99439 309 aaKnown RBP13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 MROQ9BYG7 248 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 S100A14Q9HCY8 104 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 HIF1ANQ9NWT6 349 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 DNAJC27Q9NZQ0 273 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 WARS2Q9UGM6 360 aaKnown RBP13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 LRP12Q9Y561 859 aa13.02□□□□□ -0.33
SRGAP2C-205ENST00000617209 hCG_38984A0A1B0GV85 526 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 ISPDA4D126 451 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 PHYHO14832 338 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 PLPP2O43688 288 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 MDH2P40926 338 aaKnown RBP13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 PMELP40967 661 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 GSK3AP49840 483 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 MZT1Q08AG7 82 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 ZMYND11Q15326 602 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 SLC25A30Q5SVS4 291 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 KRT74Q7RTS7 529 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 MOGAT3Q86VF5 341 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 MUC20Q8N307 709 aaPredicted RBP13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 KLHL36Q8N4N3 616 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 CSNK2A3Q8NEV1 391 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 OR56B2PQ8NGI1 322 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 ZNF420Q8TAQ5 688 aaPredicted RBP13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 OR8B4Q96RC9 309 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 RIBC2Q9H4K1 309 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 PATZ1Q9HBE1 687 aaKnown RBP13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 ADGRL4Q9HBW9 690 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 TMEM165Q9HC07 324 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 CLN6Q9NWW5 311 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 ORC6Q9Y5N6 252 aa13.01□□□□□ -0.33
SRGAP2C-205ENST00000617209 COL6A5A8TX70 2615 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms