RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ANGPTL5Q86XS5 388 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 DTD1Q8TEA8 209 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 TIMM29Q9BSF4 260 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 GDF2Q9UK05 429 aaPredicted RBP11.77□□□□□ -0.53
MSH6-214ENST00000616033 HHLA2Q9UM44 414 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 RCL1Q9Y2P8 373 aaKnown RBP11.77□□□□□ -0.53
MSH6-214ENST00000616033 WDFY3Q8IZQ1 3526 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 FAM186AA6NE01 2351 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 SLC31A2O15432 143 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 TNFSF12O43508 249 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 S100A7P31151 101 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 LPCAT3Q6P1A2 487 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 HSD17B11Q8NBQ5 300 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 MMABQ96EY8 250 aaPredicted RBP11.76□□□□□ -0.53
MSH6-214ENST00000616033 EMC6Q9BV81 110 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 KIR3DX1Q9H7L2 352 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 CYTL1Q9NRR1 136 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 POLR1DQ9Y2S0 133 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 ARGFXA6NJG6 315 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 FAM157CP0CG43 387 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 CT45A8P0DMV1 189 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 CT45A9P0DMV2 189 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 HLA-DOBP13765 273 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 DMWDQ09019 674 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 MEF2DQ14814 521 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 CT45A2Q5DJT8 189 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 TMEM240Q5SV17 173 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 PGAP1Q75T13 922 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 ARRDC1Q8N5I2 433 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 APCDD1LQ8NCL9 501 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 OR10A5Q9H207 317 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 ZNF701Q9NV72 531 aaPredicted RBP11.76□□□□□ -0.53
MSH6-214ENST00000616033 GDE1Q9NZC3 331 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 CARHSP1Q9Y2V2 147 aaKnown RBP11.76□□□□□ -0.53
MSH6-214ENST00000616033 HEBP2Q9Y5Z4 205 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 WIPF3A6NGB9 483 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 ZNF705GA8MUZ8 300 aaPredicted RBP11.76□□□□□ -0.53
MSH6-214ENST00000616033 ATXN7O15265 892 aaPredicted RBP11.76□□□□□ -0.53
MSH6-214ENST00000616033 CSRP1P21291 193 aaKnown RBP11.76□□□□□ -0.53
MSH6-214ENST00000616033 CAV2P51636 162 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 KIAA0141Q14154 515 aaPredicted RBP11.76□□□□□ -0.53
MSH6-214ENST00000616033 BATFQ16520 125 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 WBP2NLQ6ICG8 309 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 KCTD18Q6PI47 426 aaPredicted RBP11.76□□□□□ -0.53
MSH6-214ENST00000616033 CLEC18BQ6UXF7 455 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 RAB7BQ96AH8 199 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 SLC22A18Q96BI1 424 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 SEC61A2Q9H9S3 476 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 PRTFDC1Q9NRG1 225 aa11.76□□□□□ -0.53
MSH6-214ENST00000616033 MRPL22Q9NWU5 206 aaKnown RBP11.76□□□□□ -0.53
MSH6-214ENST00000616033 TEX13DA0A0J9YY54 714 aaPredicted RBP11.75□□□□□ -0.53
MSH6-214ENST00000616033 FGF16O43320 207 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 XRCC2O43543 280 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 CD79AP11912 226 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 PPICP45877 212 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 MIDNQ504T8 468 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 FBXO46Q6PJ61 603 aaPredicted RBP11.75□□□□□ -0.53
MSH6-214ENST00000616033 ZNF248Q8NDW4 579 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 RTN4RQ9BZR6 473 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 RAB27BO00194 218 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 SOCS1O15524 211 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 OR8U8P0C7N1 319 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 FOXL2P58012 376 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 ECH1Q13011 328 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 LINC00114Q6XXX2 140 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 OOSP2Q86WS3 158 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 PHOSPHO2Q8TCD6 241 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 THAP3Q8WTV1 239 aaPredicted RBP11.75□□□□□ -0.53
MSH6-214ENST00000616033 FAM71F1Q96KD3 344 aaPredicted RBP11.75□□□□□ -0.53
MSH6-214ENST00000616033 SOX7Q9BT81 388 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 HDAC8Q9BY41 377 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 HIF3AQ9Y2N7 669 aa11.75□□□□□ -0.53
MSH6-214ENST00000616033 C5orf52A6NGY3 159 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 ZNF727A8MUV8 499 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 DUS4LO95620 317 aaKnown RBP11.74□□□□□ -0.53
MSH6-214ENST00000616033 CD1AP06126 327 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 AMY2BP19961 511 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 RPS21P63220 83 aaKnown RBP11.74□□□□□ -0.53
MSH6-214ENST00000616033 DCDP81605 110 aaKnown RBP11.74□□□□□ -0.53
MSH6-214ENST00000616033 OR8G1Q15617 311 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 RSPO4Q2I0M5 234 aaPredicted RBP11.74□□□□□ -0.53
MSH6-214ENST00000616033 ANKRD55Q3KP44 614 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 C9orf50Q5SZB4 431 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 RNF128Q8TEB7 428 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 RSC1A1Q92681 617 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 G6PC3Q9BUM1 346 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 TCEAL2Q9H3H9 227 aaPredicted RBP11.74□□□□□ -0.53
MSH6-214ENST00000616033 OR52A1Q9UKL2 312 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 SLC5A6Q9Y289 635 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 SDK2Q58EX2 2172 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 LINC01553A4QN01 128 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 ZNF878C9JN71 531 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 DIRAS3O95661 229 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 HCKP08631 526 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 H2BFMP0C1H6 154 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 SLC35E2P0CK97 266 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 ZNF25P17030 456 aaPredicted RBP11.74□□□□□ -0.53
MSH6-214ENST00000616033 GNG10P50151 68 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 IAH1Q2TAA2 248 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms