RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 CT45A1Q5HYN5 189 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 OR2A2Q6IF42 318 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 CT45A3Q8NHU0 189 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 OR8B4Q96RC9 309 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 WSB1Q9Y6I7 421 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 CACNA1CQ13936 2221 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 OR5K3A6NET4 321 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 SPINT2O43291 252 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 CD96P40200 585 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 ZNF574Q6ZN55 896 aaPredicted RBP17.04■□□□□ 0.32
SPAST-203ENST00000615843 C16orf52Q8NHV5 167 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 RSRP1Q9BUV0 290 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 PSENENQ9NZ42 101 aa17.04■□□□□ 0.32
SPAST-203ENST00000615843 C9orf170A2RU37 121 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 M0R135 149 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 PPICP45877 212 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 DHODHQ02127 395 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 ZNF92Q03936 586 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 CA13Q8N1Q1 262 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 CNEP1R1Q8N9A8 125 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 ZNF799Q96GE5 643 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 VAMP8Q9BV40 100 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 C1QTNF6Q9BXI9 259 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 ADGRL4Q9HBW9 690 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 MED29Q9NX70 200 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 PPP1R3CQ9UQK1 317 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 WDR1O75083 606 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 CTAG2O75638 210 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 GHRLQ9UBU3 117 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 PISDQ9UG56 409 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 HOXC8P31273 242 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 PLAC9Q5JTB6 97 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 KDF1Q8NAX2 398 aaPredicted RBP17.03■□□□□ 0.32
SPAST-203ENST00000615843 OTOSQ8NHW6 89 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 LMAN1LQ9HAT1 526 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 FGF21Q9NSA1 209 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 SERPINE3A8MV23 424 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 CLDN34H7C241 214 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 FXNQ16595 210 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 LHFPL2Q6ZUX7 228 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 RTN4RL1Q86UN2 441 aaPredicted RBP17.03■□□□□ 0.32
SPAST-203ENST00000615843 BHLHE23Q8NDY6 225 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 OR5B3Q8NH48 314 aa17.03■□□□□ 0.32
SPAST-203ENST00000615843 TMEM272A0A1B0GTI8 110 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 OR2J2O76002 312 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 CST7O76096 145 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 DCDP81605 110 aaKnown RBP17.02■□□□□ 0.32
SPAST-203ENST00000615843 PRAMEF5Q5TYX0 476 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 PRAMEF6Q5VXH4 476 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 TOMM20LQ6UXN7 152 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 OR2A1Q8NGT9 310 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 PBX4Q9BYU1 374 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 NTMQ9P121 344 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 ARL2-SNX15V9GYD0 113 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 PKD1L3Q7Z443 1732 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 GSTZ1O43708 216 aaPredicted RBP17.02■□□□□ 0.32
SPAST-203ENST00000615843 TIMM8AO60220 97 aaPredicted RBP17.02■□□□□ 0.32
SPAST-203ENST00000615843 RAB32Q13637 225 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 KCNAB1Q14722 419 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 LAIR1Q6GTX8 287 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 ZNF687Q8N1G0 1237 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 VN1R2Q8NFZ6 395 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 CMTM2Q8TAZ6 248 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 SLC37A2Q8TED4 501 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 TMEM37Q8WXS4 190 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 CDCA3Q99618 268 aaPredicted RBP17.02■□□□□ 0.32
SPAST-203ENST00000615843 SOX7Q9BT81 388 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 CALHM2Q9HA72 323 aa17.02■□□□□ 0.32
SPAST-203ENST00000615843 ZNF98A6NK75 572 aa17.02■□□□□ 0.31
SPAST-203ENST00000615843 ICOSLGO75144 302 aa17.02■□□□□ 0.31
SPAST-203ENST00000615843 INHBBP09529 407 aa17.02■□□□□ 0.31
SPAST-203ENST00000615843 GABRA4P48169 554 aa17.02■□□□□ 0.31
SPAST-203ENST00000615843 UBE2G1P62253 170 aa17.02■□□□□ 0.31
SPAST-203ENST00000615843 PLA1AQ53H76 456 aa17.02■□□□□ 0.31
SPAST-203ENST00000615843 SLC24A4Q8NFF2 622 aa17.02■□□□□ 0.31
SPAST-203ENST00000615843 CTDSP1Q9GZU7 261 aa17.02■□□□□ 0.31
SPAST-203ENST00000615843 CLCF1Q9UBD9 225 aa17.02■□□□□ 0.31
SPAST-203ENST00000615843 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.02■□□□□ 0.31
SPAST-203ENST00000615843 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.02■□□□□ 0.31
SPAST-203ENST00000615843 TCN2P20062 427 aa17.02■□□□□ 0.31
SPAST-203ENST00000615843 MRPS21P82921 87 aaKnown RBP17.02■□□□□ 0.31
SPAST-203ENST00000615843 RUNX2Q13950 521 aa17.02■□□□□ 0.31
SPAST-203ENST00000615843 CCDC74AQ96AQ1 378 aa17.02■□□□□ 0.31
SPAST-203ENST00000615843 C20orf141Q9NUB4 165 aa17.02■□□□□ 0.31
SPAST-203ENST00000615843 SFT2D2O95562 160 aa17.01■□□□□ 0.31
SPAST-203ENST00000615843 WNT11O96014 354 aa17.01■□□□□ 0.31
SPAST-203ENST00000615843 SCAND1P57086 179 aa17.01■□□□□ 0.31
SPAST-203ENST00000615843 ETFBKMTQ8IXQ9 262 aa17.01■□□□□ 0.31
SPAST-203ENST00000615843 TEX101Q9BY14 249 aa17.01■□□□□ 0.31
SPAST-203ENST00000615843 A0A1W2PPH5 198 aa17.01■□□□□ 0.31
SPAST-203ENST00000615843 ZNF732B4DXR9 585 aa17.01■□□□□ 0.31
SPAST-203ENST00000615843 AQP7O14520 342 aa17.01■□□□□ 0.31
SPAST-203ENST00000615843 HNRNPA3P51991 378 aaKnown RBP17.01■□□□□ 0.31
SPAST-203ENST00000615843 PMP22Q01453 160 aa17.01■□□□□ 0.31
SPAST-203ENST00000615843 B3GAT1Q9P2W7 334 aa17.01■□□□□ 0.31
SPAST-203ENST00000615843 CTDSPLO15194 276 aa17.01■□□□□ 0.31
SPAST-203ENST00000615843 PCBP3P57721 371 aaKnown RBP17.01■□□□□ 0.31
SPAST-203ENST00000615843 CDONQ4KMG0 1287 aa17.01■□□□□ 0.31
SPAST-203ENST00000615843 WDR38Q5JTN6 314 aa17.01■□□□□ 0.31
SPAST-203ENST00000615843 PPM1DO15297 605 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms