RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 MAFAQ8NHW3 353 aaPredicted RBP9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 SLC25A19Q9HC21 320 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 LAMP3Q9UQV4 416 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 TMEM210A6NLX4 147 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ARPC1BO15143 372 aaKnown RBP9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 NFYAP23511 347 aaPredicted RBP9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 CDKN2DP55273 166 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 SH3BP2P78314 561 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ECSCRQ19T08 205 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 GTDC1Q4AE62 458 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 WBP2Q969T9 261 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 GPR146Q96CH1 333 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ADOQ96SZ5 270 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 SLC12A9Q9BXP2 914 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 CYSLTR1Q9Y271 337 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 DYSFO75923 2080 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 A0A0D9SEW6 157 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 TRBV7-9A0A0J9YWB2 115 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 FAM189BP81408 668 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 RPEQ96AT9 228 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 NME4O00746 187 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 SIGLEC6O43699 453 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ARR3P36575 388 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 MLLT11Q13015 90 aaPredicted RBP9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 C18orf21Q32NC0 220 aaPredicted RBP9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 PIGTQ969N2 578 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 TAAR9Q96RI9 348 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 NKX2-4Q9H2Z4 354 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ZNF391Q9UJN7 358 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 CACNA1BQ00975 2339 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ABCA1O95477 2261 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 SPATA46Q5T0L3 261 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 KRTCAP2Q8N6L1 136 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 HSH2DQ96JZ2 352 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 SYT17Q9BSW7 474 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 GPR87Q9BY21 358 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 MRPL20Q9BYC9 149 aaKnown RBP9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 KLK15Q9H2R5 256 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ZNF696Q9H7X3 374 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 PDLIM7Q9NR12 457 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 SPHK2Q9NRA0 654 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ANXA10Q9UJ72 324 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 RFPL4AA6NLU0 287 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 RFPL4AL1F8VTS6 287 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 CREG1O75629 220 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 IL2RAP01589 272 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 F13BP05160 661 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 OTX1P32242 354 aaPredicted RBP9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 RPS26P11Q5JNZ5 115 aaPredicted RBP9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 SPANXN1Q5VSR9 72 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 OR2T5Q6IEZ7 315 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 RGMBQ6NW40 437 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 AAED1Q7RTV5 226 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 CHST14Q8NCH0 376 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 OR2T29Q8NH02 315 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 TMUB1Q9BVT8 246 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 CDX4O14627 284 aaPredicted RBP9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 PRPS1L1P21108 318 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 GALNSP34059 522 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 RAB15P59190 212 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 KIAA1024LP59773 190 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 FAM3AP98173 230 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 SORDQ00796 357 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ZNF239Q16600 458 aaKnown RBP9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 FRG2Q64ET8 278 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 USP50Q70EL3 339 aaPredicted RBP9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 FRG2BQ96QU4 278 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 FOXQ1Q9C009 403 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 UBQLN3Q9H347 655 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 PSG11Q9UQ72 335 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ROBO1Q9Y6N7 1651 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 NRXN3Q9Y4C0 1643 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 A0A1W2PNR3 127 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 GSRP00390 522 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 F12P00748 615 aaPredicted RBP9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 CCL5P13501 91 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 CD1DP15813 335 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 C21orf33P30042 268 aaPredicted RBP9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 MPEG1Q2M385 716 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 GEMIN7Q9H840 131 aaKnown RBP9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 TRAPPC1Q9Y5R8 145 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ZNF415Q09FC8 603 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 OR1L8Q8NGR8 309 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 BAALCQ8WXS3 180 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 MCHR2Q969V1 340 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 MS4A10Q96PG2 267 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 RASL11BQ9BPW5 248 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 DCTN5Q9BTE1 182 aa9.88□□□□□ -0.83
CNTNAP3B-211ENST00000612828 PHF3Q92576 2039 aaKnown RBP9.87□□□□□ -0.83
CNTNAP3B-211ENST00000612828 A0A0G2JLL6 359 aaPredicted RBP9.87□□□□□ -0.83
CNTNAP3B-211ENST00000612828 IGHG1P01857 330 aa9.87□□□□□ -0.83
CNTNAP3B-211ENST00000612828 MYOGP15173 224 aa9.87□□□□□ -0.83
CNTNAP3B-211ENST00000612828 CD68P34810 354 aaPredicted RBP9.87□□□□□ -0.83
CNTNAP3B-211ENST00000612828 CD96P40200 585 aa9.87□□□□□ -0.83
CNTNAP3B-211ENST00000612828 FOXA1P55317 472 aa9.87□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ALKAL2Q6UX46 152 aa9.87□□□□□ -0.83
CNTNAP3B-211ENST00000612828 PRRT2Q7Z6L0 340 aaPredicted RBP9.87□□□□□ -0.83
CNTNAP3B-211ENST00000612828 TMEM252Q8N6L7 170 aa9.87□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ERGIC1Q969X5 290 aa9.87□□□□□ -0.83
CNTNAP3B-211ENST00000612828 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms