RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 A0A1W2PQL4 384 aaPredicted RBP21.88■■□□□ 1.09
TRIM28-204ENST00000594806 H0YJX3 145 aa21.88■■□□□ 1.09
TRIM28-204ENST00000594806 KRT8P05787 483 aa21.88■■□□□ 1.09
TRIM28-204ENST00000594806 COL8A2P25067 703 aa21.88■■□□□ 1.09
TRIM28-204ENST00000594806 PLEKHG7Q6ZR37 379 aa21.88■■□□□ 1.09
TRIM28-204ENST00000594806 CIARTQ8N365 385 aaPredicted RBP21.88■■□□□ 1.09
TRIM28-204ENST00000594806 ADI1Q9BV57 179 aa21.88■■□□□ 1.09
TRIM28-204ENST00000594806 MOB1AQ9H8S9 216 aa21.88■■□□□ 1.09
TRIM28-204ENST00000594806 EXOGQ9Y2C4 368 aaKnown RBP21.88■■□□□ 1.09
TRIM28-204ENST00000594806 VPS13CQ709C8 3753 aa21.88■■□□□ 1.09
TRIM28-204ENST00000594806 C5orf63A6NC05 138 aa21.87■■□□□ 1.09
TRIM28-204ENST00000594806 PRR32B1ATL7 298 aa21.87■■□□□ 1.09
TRIM28-204ENST00000594806 PSMD9O00233 223 aa21.87■■□□□ 1.09
TRIM28-204ENST00000594806 FAM3AP98173 230 aa21.87■■□□□ 1.09
TRIM28-204ENST00000594806 IL5RAQ01344 420 aa21.87■■□□□ 1.09
TRIM28-204ENST00000594806 HFEQ30201 348 aa21.87■■□□□ 1.09
TRIM28-204ENST00000594806 KLBQ86Z14 1044 aa21.87■■□□□ 1.09
TRIM28-204ENST00000594806 EGFL6Q8IUX8 553 aa21.87■■□□□ 1.09
TRIM28-204ENST00000594806 BHLHE23Q8NDY6 225 aa21.87■■□□□ 1.09
TRIM28-204ENST00000594806 YIPF5Q969M3 257 aa21.87■■□□□ 1.09
TRIM28-204ENST00000594806 TBX5Q99593 518 aa21.87■■□□□ 1.09
TRIM28-204ENST00000594806 MRPS18AQ9NVS2 196 aaKnown RBP21.87■■□□□ 1.09
TRIM28-204ENST00000594806 ZNF319Q9P2F9 582 aa21.87■■□□□ 1.09
TRIM28-204ENST00000594806 CR1P17927 2039 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 A0A096LNT2 108 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 A0A0U1RQV5 110 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 METTL15A6NJ78 407 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 J3QRE1 110 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 RP2O75695 350 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 DBTP11182 482 aaKnown RBP21.86■■□□□ 1.09
TRIM28-204ENST00000594806 USF1P22415 310 aaPredicted RBP21.86■■□□□ 1.09
TRIM28-204ENST00000594806 ANOS1P23352 680 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 CAPGP40121 348 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 SRP9P49458 86 aaKnown RBP21.86■■□□□ 1.09
TRIM28-204ENST00000594806 ZNF91Q05481 1191 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 SLC3A1Q07837 685 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 RIPK1Q13546 671 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 KCTD20Q7Z5Y7 419 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 RFLNBQ8N5W9 214 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 CSNK2A3Q8NEV1 391 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 OR8B12Q8NGG6 310 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 MRPL48Q96GC5 212 aaKnown RBP21.86■■□□□ 1.09
TRIM28-204ENST00000594806 BPESC1Q9GZL8 116 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 VCX3BQ9H321 246 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 NUFIP1Q9UHK0 495 aaKnown RBP21.86■■□□□ 1.09
TRIM28-204ENST00000594806 MRM2Q9UI43 246 aaKnown RBP21.86■■□□□ 1.09
TRIM28-204ENST00000594806 R4GMQ9 66 aa21.86■■□□□ 1.09
TRIM28-204ENST00000594806 TANC2Q9HCD6 1990 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 ZNF469Q96JG9 3925 aaPredicted RBP21.85■■□□□ 1.09
TRIM28-204ENST00000594806 hCG_38984A0A1B0GV85 526 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 LYNX1G3V0Z9 82 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 GMDSO60547 372 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 APOL3O95236 402 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 FADS2O95864 444 aaKnown RBP21.85■■□□□ 1.09
TRIM28-204ENST00000594806 LYNX1P0DP58 116 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 RAB40BQ12829 278 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 KLHL22Q53GT1 634 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 ZNF684Q5T5D7 378 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 ZNF771Q7L3S4 317 aaPredicted RBP21.85■■□□□ 1.09
TRIM28-204ENST00000594806 FTMTQ8N4E7 242 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 ACBD7Q8N6N7 88 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 CELF2-AS1Q8N7Q2 184 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 YIPF7Q8N8F6 280 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 SPERTQ8NA61 448 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 OR56B2PQ8NGI1 322 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 APH1BQ8WW43 257 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 LGALS12Q96DT0 336 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 TTTY10Q9BZA0 68 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 PBOV1Q9GZY1 135 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 ZNF275Q9NSD4 429 aaPredicted RBP21.85■■□□□ 1.09
TRIM28-204ENST00000594806 AASSQ9UDR5 926 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 SNX5Q9Y5X3 404 aa21.85■■□□□ 1.09
TRIM28-204ENST00000594806 ANKRD30BLA7E2S9 258 aa21.84■■□□□ 1.09
TRIM28-204ENST00000594806 IFNL4K9M1U5 179 aa21.84■■□□□ 1.09
TRIM28-204ENST00000594806 SMAD7O15105 426 aaKnown RBP21.84■■□□□ 1.09
TRIM28-204ENST00000594806 SRSF10O75494 262 aaKnown RBP21.84■■□□□ 1.09
TRIM28-204ENST00000594806 ATP6V1B1P15313 513 aa21.84■■□□□ 1.09
TRIM28-204ENST00000594806 GPR6P46095 362 aaPredicted RBP21.84■■□□□ 1.09
TRIM28-204ENST00000594806 GSK3AP49840 483 aa21.84■■□□□ 1.09
TRIM28-204ENST00000594806 MZT1Q08AG7 82 aa21.84■■□□□ 1.09
TRIM28-204ENST00000594806 OR8B8Q15620 311 aa21.84■■□□□ 1.09
TRIM28-204ENST00000594806 SSX6Q7RTT6 188 aa21.84■■□□□ 1.09
TRIM28-204ENST00000594806 OR2V2Q96R30 315 aa21.84■■□□□ 1.09
TRIM28-204ENST00000594806 INPP5EQ9NRR6 644 aa21.84■■□□□ 1.09
TRIM28-204ENST00000594806 DYSFO75923 2080 aa21.83■■□□□ 1.09
TRIM28-204ENST00000594806 DAPL1A0PJW8 107 aa21.83■■□□□ 1.09
TRIM28-204ENST00000594806 LOC110117498-PIK3R3F6TDL0 507 aa21.83■■□□□ 1.09
TRIM28-204ENST00000594806 MLNRO43193 412 aa21.83■■□□□ 1.09
TRIM28-204ENST00000594806 CDC14BO60729 498 aa21.83■■□□□ 1.09
TRIM28-204ENST00000594806 LILRA1O75019 489 aa21.83■■□□□ 1.09
TRIM28-204ENST00000594806 WBP4O75554 376 aaKnown RBP21.83■■□□□ 1.09
TRIM28-204ENST00000594806 TACSTD2P09758 323 aa21.83■■□□□ 1.09
TRIM28-204ENST00000594806 PRSS12P56730 875 aa21.83■■□□□ 1.09
TRIM28-204ENST00000594806 ISL1P61371 349 aa21.83■■□□□ 1.09
TRIM28-204ENST00000594806 ZNF85Q03923 595 aa21.83■■□□□ 1.09
TRIM28-204ENST00000594806 FAM220AQ7Z4H9 259 aa21.83■■□□□ 1.09
TRIM28-204ENST00000594806 C8orf59Q8N0T1 100 aaPredicted RBP21.83■■□□□ 1.09
TRIM28-204ENST00000594806 YLPM1P49750 1951 aaKnown RBP21.83■■□□□ 1.08
TRIM28-204ENST00000594806 IRGMA1A4Y4 181 aa21.82■■□□□ 1.08
TRIM28-204ENST00000594806 CLDN25C9JDP6 229 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms