RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 COMMD3-BMI1R4GMX3 469 aa8.8□□□□□ -1
USE1-203ENST00000593597 IGHV1-69DA0A0B4J2H0 117 aa8.79□□□□□ -1
USE1-203ENST00000593597 CLPSL1A2RUU4 121 aa8.79□□□□□ -1
USE1-203ENST00000593597 OOEPA6NGQ2 149 aa8.79□□□□□ -1
USE1-203ENST00000593597 DVL1O14640 695 aa8.79□□□□□ -1
USE1-203ENST00000593597 OR10H3O60404 316 aa8.79□□□□□ -1
USE1-203ENST00000593597 GPR137BO60478 399 aa8.79□□□□□ -1
USE1-203ENST00000593597 TSPAN15O95858 294 aa8.79□□□□□ -1
USE1-203ENST00000593597 IGHV1-69P01742 117 aa8.79□□□□□ -1
USE1-203ENST00000593597 IRF2P14316 349 aa8.79□□□□□ -1
USE1-203ENST00000593597 NOS3P29474 1203 aa8.79□□□□□ -1
USE1-203ENST00000593597 RRM2P31350 389 aa8.79□□□□□ -1
USE1-203ENST00000593597 NPY4RP50391 375 aa8.79□□□□□ -1
USE1-203ENST00000593597 TPTEP56180 551 aa8.79□□□□□ -1
USE1-203ENST00000593597 PROK1P58294 105 aa8.79□□□□□ -1
USE1-203ENST00000593597 ECH1Q13011 328 aa8.79□□□□□ -1
USE1-203ENST00000593597 SLC36A3Q495N2 470 aa8.79□□□□□ -1
USE1-203ENST00000593597 KLHL12Q53G59 568 aa8.79□□□□□ -1
USE1-203ENST00000593597 TEX36Q5VZQ5 186 aa8.79□□□□□ -1
USE1-203ENST00000593597 BTN2A1Q7KYR7 527 aa8.79□□□□□ -1
USE1-203ENST00000593597 LDLRAD3Q86YD5 345 aa8.79□□□□□ -1
USE1-203ENST00000593597 PDZD9Q8IXQ8 264 aa8.79□□□□□ -1
USE1-203ENST00000593597 TMEM86BQ8N661 226 aa8.79□□□□□ -1
USE1-203ENST00000593597 OR9Q1Q8NGQ5 310 aa8.79□□□□□ -1
USE1-203ENST00000593597 OR4F5Q8NH21 305 aa8.79□□□□□ -1
USE1-203ENST00000593597 LINC01006Q8NI28 216 aa8.79□□□□□ -1
USE1-203ENST00000593597 SPRYD4Q8WW59 207 aaPredicted RBP8.79□□□□□ -1
USE1-203ENST00000593597 LHX4Q969G2 390 aa8.79□□□□□ -1
USE1-203ENST00000593597 PYURFQ96I23 114 aa8.79□□□□□ -1
USE1-203ENST00000593597 FN3KRPQ9HA64 309 aa8.79□□□□□ -1
USE1-203ENST00000593597 BEX1Q9HBH7 125 aa8.79□□□□□ -1
USE1-203ENST00000593597 SPAG4Q9NPE6 437 aa8.79□□□□□ -1
USE1-203ENST00000593597 ACOXLQ9NUZ1 547 aa8.79□□□□□ -1
USE1-203ENST00000593597 ARGLU1Q9NWB6 273 aaPredicted RBP8.79□□□□□ -1
USE1-203ENST00000593597 CD300AQ9UGN4 299 aa8.79□□□□□ -1
USE1-203ENST00000593597 GMDSO60547 372 aa8.78□□□□□ -1
USE1-203ENST00000593597 CCDC22O60826 627 aa8.78□□□□□ -1
USE1-203ENST00000593597 HLA-DQA2P01906 255 aa8.78□□□□□ -1
USE1-203ENST00000593597 TFF1P04155 84 aa8.78□□□□□ -1
USE1-203ENST00000593597 GYPBP06028 91 aa8.78□□□□□ -1
USE1-203ENST00000593597 GRPP07492 148 aa8.78□□□□□ -1
USE1-203ENST00000593597 CLUP10909 449 aa8.78□□□□□ -1
USE1-203ENST00000593597 SELLP14151 372 aa8.78□□□□□ -1
USE1-203ENST00000593597 IER3P46695 156 aa8.78□□□□□ -1
USE1-203ENST00000593597 PRKXP51817 358 aa8.78□□□□□ -1
USE1-203ENST00000593597 BPIFB3P59826 476 aa8.78□□□□□ -1
USE1-203ENST00000593597 ARF6P62330 175 aa8.78□□□□□ -1
USE1-203ENST00000593597 CSNK2BP67870 215 aa8.78□□□□□ -1
USE1-203ENST00000593597 TSPAN31Q12999 210 aa8.78□□□□□ -1
USE1-203ENST00000593597 MALLQ13021 153 aa8.78□□□□□ -1
USE1-203ENST00000593597 OR8B8Q15620 311 aa8.78□□□□□ -1
USE1-203ENST00000593597 TAF9Q16594 264 aa8.78□□□□□ -1
USE1-203ENST00000593597 PCK2Q16822 640 aa8.78□□□□□ -1
USE1-203ENST00000593597 ZNF770Q6IQ21 691 aaPredicted RBP8.78□□□□□ -1
USE1-203ENST00000593597 BRICD5Q6PL45 260 aa8.78□□□□□ -1
USE1-203ENST00000593597 PRSS45Q7RTY3 260 aa8.78□□□□□ -1
USE1-203ENST00000593597 DCXRQ7Z4W1 244 aa8.78□□□□□ -1
USE1-203ENST00000593597 ZDHHC21Q8IVQ6 265 aa8.78□□□□□ -1
USE1-203ENST00000593597 LNX2Q8N448 690 aa8.78□□□□□ -1
USE1-203ENST00000593597 ZNF511Q8NB15 262 aa8.78□□□□□ -1
USE1-203ENST00000593597 SLC37A3Q8NCC5 494 aa8.78□□□□□ -1
USE1-203ENST00000593597 LY6G5BQ8NDX9 201 aa8.78□□□□□ -1
USE1-203ENST00000593597 OR4C15Q8NGM1 316 aa8.78□□□□□ -1
USE1-203ENST00000593597 OR2AJ1Q8NGZ0 328 aa8.78□□□□□ -1
USE1-203ENST00000593597 OR4Q3Q8NH05 313 aa8.78□□□□□ -1
USE1-203ENST00000593597 GATAD2BQ8WXI9 593 aa8.78□□□□□ -1
USE1-203ENST00000593597 SPSB4Q96A44 273 aa8.78□□□□□ -1
USE1-203ENST00000593597 FAM71F1Q96KD3 344 aaPredicted RBP8.78□□□□□ -1
USE1-203ENST00000593597 RBM4BQ9BQ04 359 aaKnown RBP8.78□□□□□ -1
USE1-203ENST00000593597 NMNAT2Q9BZQ4 307 aa8.78□□□□□ -1
USE1-203ENST00000593597 FGF23Q9GZV9 251 aaPredicted RBP8.78□□□□□ -1
USE1-203ENST00000593597 VNN3Q9NY84 501 aa8.78□□□□□ -1
USE1-203ENST00000593597 MRPL15Q9P015 296 aaKnown RBP8.78□□□□□ -1
USE1-203ENST00000593597 ZNF319Q9P2F9 582 aa8.78□□□□□ -1
USE1-203ENST00000593597 ERVK-18Q9QC07 812 aa8.78□□□□□ -1
USE1-203ENST00000593597 KAAG1Q9UBP8 84 aa8.78□□□□□ -1
USE1-203ENST00000593597 KCNG2Q9UJ96 466 aa8.78□□□□□ -1
USE1-203ENST00000593597 LYVE1Q9Y5Y7 322 aa8.78□□□□□ -1
USE1-203ENST00000593597 POMT1Q9Y6A1 747 aa8.78□□□□□ -1
USE1-203ENST00000593597 CDH10Q9Y6N8 788 aa8.78□□□□□ -1
USE1-203ENST00000593597 TET2Q6N021 2002 aaPredicted RBP8.78□□□□□ -1
USE1-203ENST00000593597 A0A1B0GUS0 222 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 MEGF11A6BM72 1044 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 GGT3PA6NGU5 568 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 ARPC2O15144 300 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 IDH3BO43837 385 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 CLPXO76031 633 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 FAM3AP98173 230 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 PPP1R8Q12972 351 aaKnown RBP8.77□□□□□ -1.01
USE1-203ENST00000593597 CRMP1Q14194 572 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 KRT72Q14CN4 511 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 WDR38Q5JTN6 314 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 LINC01590Q5TEZ4 76 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 CD276Q5ZPR3 534 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 HIST2H2BDQ6DRA6 164 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 DRAM2Q6UX65 266 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 C17orf107Q6ZR85 190 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 Q6ZSV7 163 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 VMO1Q7Z5L0 202 aa8.77□□□□□ -1.01
USE1-203ENST00000593597 FAM216BQ8N7L0 139 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms