RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 CENPMQ9NSP4 180 aa16.99■□□□□ 0.31
TRIM47-207ENST00000593089 MRPL15Q9P015 296 aaKnown RBP16.99■□□□□ 0.31
TRIM47-207ENST00000593089 KIF17Q9P2E2 1029 aa16.99■□□□□ 0.31
TRIM47-207ENST00000593089 LYVE1Q9Y5Y7 322 aa16.99■□□□□ 0.31
TRIM47-207ENST00000593089 PKD1L1Q8TDX9 2849 aa16.99■□□□□ 0.31
TRIM47-207ENST00000593089 TRAV38-1A0A0B4J264 116 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 FAM181BA6NEQ2 426 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 OOEPA6NGQ2 149 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 A6NLC8 198 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 ZNF879B4DU55 563 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 TNFRSF11BO00300 401 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 KRT36O76013 467 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 TOX4O94842 621 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 GYPAP02724 150 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 GYPBP06028 91 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 BPIFB3P59826 476 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 ZNF362Q5T0B9 420 aaPredicted RBP16.98■□□□□ 0.31
TRIM47-207ENST00000593089 FIP1L1Q6UN15 594 aaKnown RBP16.98■□□□□ 0.31
TRIM47-207ENST00000593089 Q6YL49 198 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 CPLX4Q7Z7G2 160 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 PLPP7Q8NBV4 271 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 OR56B2PQ8NGI1 322 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 SLAMF6Q96DU3 332 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 TBX15Q96SF7 602 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 KCNJ15Q99712 375 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 SMURF1Q9HCE7 757 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 TBC1D23Q9NUY8 699 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 ARL8BQ9NVJ2 186 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 IL20Q9NYY1 176 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 TAGLN3Q9UI15 199 aa16.98■□□□□ 0.31
TRIM47-207ENST00000593089 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.97■□□□□ 0.31
TRIM47-207ENST00000593089 hCG_1807616A0A1W2PRN6 198 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 P2RY10O00398 339 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 GASTP01350 101 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 CRYBA1P05813 215 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 LIPFP07098 398 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 ENTPD1P49961 510 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 HMGA2P52926 109 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 CRMP1Q14194 572 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 CYP2R1Q6VVX0 501 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 DEFB107AQ8IZN7 70 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 SPERTQ8NA61 448 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 ZNF511Q8NB15 262 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 WDFY2Q96P53 400 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 TSSK6Q9BXA6 273 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 NOX4Q9NPH5 578 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 TRIM36Q9NQ86 728 aa16.97■□□□□ 0.31
TRIM47-207ENST00000593089 CENPVL3A0A0U1RRI6 287 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 ZNF593O00488 134 aaPredicted RBP16.96■□□□□ 0.31
TRIM47-207ENST00000593089 TNFRSF13BO14836 293 aaPredicted RBP16.96■□□□□ 0.31
TRIM47-207ENST00000593089 TBX1O43435 398 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 CCNB2O95067 398 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 MMP9P14780 707 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 FMO3P31513 532 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 MXRA7P84157 204 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 POU4F2Q12837 409 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 PPP1R8Q12972 351 aaKnown RBP16.96■□□□□ 0.31
TRIM47-207ENST00000593089 METTL11BQ5VVY1 283 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 C16orf89Q6UX73 402 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 RASSF6Q6ZTQ3 369 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 LINC00471Q8N535 108 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 GCSAMQ8N6F7 178 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 KIR3DL3Q8N743 410 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 PNLDC1Q8NA58 520 aaKnown RBP16.96■□□□□ 0.31
TRIM47-207ENST00000593089 CHIAQ9BZP6 476 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 TRIM15Q9C019 465 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 C14orf119Q9NWQ9 140 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 MMP24Q9Y5R2 645 aa16.96■□□□□ 0.31
TRIM47-207ENST00000593089 IGHV3OR15-7A0A075B7D8 119 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 ZNF878C9JN71 531 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 XRCC2O43543 280 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 NDUFA2O43678 99 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 KNG1P01042 644 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 MELTFP08582 738 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 CLUP10909 449 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 SPI1P17947 270 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 ATP6V1B2P21281 511 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 RAG2P55895 527 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 SRSF4Q08170 494 aaKnown RBP16.95■□□□□ 0.3
TRIM47-207ENST00000593089 MZT1Q08AG7 82 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 ZNF770Q6IQ21 691 aaPredicted RBP16.95■□□□□ 0.3
TRIM47-207ENST00000593089 FAM90A1Q86YD7 464 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 AQP11Q8NBQ7 271 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 OR6K6Q8NGW6 343 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 OR4Q3Q8NH05 313 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 OR8S1Q8NH09 359 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 GATAD2BQ8WXI9 593 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 OPA3Q9H6K4 179 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 BEX1Q9HBH7 125 aa16.95■□□□□ 0.3
TRIM47-207ENST00000593089 ANKRD30BLA7E2S9 258 aa16.94■□□□□ 0.3
TRIM47-207ENST00000593089 DVL1O14640 695 aa16.94■□□□□ 0.3
TRIM47-207ENST00000593089 FCN3O75636 299 aa16.94■□□□□ 0.3
TRIM47-207ENST00000593089 SOX14O95416 240 aa16.94■□□□□ 0.3
TRIM47-207ENST00000593089 ANXA2P07355 339 aaKnown RBP16.94■□□□□ 0.3
TRIM47-207ENST00000593089 PCK2Q16822 640 aa16.94■□□□□ 0.3
TRIM47-207ENST00000593089 C17orf107Q6ZR85 190 aa16.94■□□□□ 0.3
TRIM47-207ENST00000593089 BTN2A1Q7KYR7 527 aa16.94■□□□□ 0.3
TRIM47-207ENST00000593089 OR4F5Q8NH21 305 aa16.94■□□□□ 0.3
TRIM47-207ENST00000593089 LHX4Q969G2 390 aa16.94■□□□□ 0.3
TRIM47-207ENST00000593089 FAM71F1Q96KD3 344 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms