RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ZNF469Q96JG9 3925 aaPredicted RBP8.26□□□□□ -1.09
DDX39A-220ENST00000593008 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
DDX39A-220ENST00000593008 A0A1B0GTI1 187 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 OR4C45A6NMZ5 311 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 SULT1C4O75897 302 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 TNFAIP8O95379 198 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 DANCRP0C864 163 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 HSMCR30P0CW71 290 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 ACKR3P25106 362 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 GP2P55259 537 aaKnown RBP8.26□□□□□ -1.09
DDX39A-220ENST00000593008 UCP2P55851 309 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 ATP5J2P56134 94 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 RPS25P62851 125 aaKnown RBP8.26□□□□□ -1.09
DDX39A-220ENST00000593008 CSNK2BP67870 215 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 SLC3A1Q07837 685 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 ECH1Q13011 328 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 TNK1Q13470 666 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 GK2Q14410 553 aaPredicted RBP8.26□□□□□ -1.09
DDX39A-220ENST00000593008 CDK5R1Q15078 307 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 TBCEQ15813 527 aaPredicted RBP8.26□□□□□ -1.09
DDX39A-220ENST00000593008 SSX1Q16384 188 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 ZNF829Q3KNS6 432 aaPredicted RBP8.26□□□□□ -1.09
DDX39A-220ENST00000593008 C3orf36Q3SXR2 165 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 DRAM2Q6UX65 266 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 OR5AS1Q8N127 324 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 BHLHE23Q8NDY6 225 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 TSPAN14Q8NG11 270 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 OR1J2Q8NGS2 313 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 OR51E1Q8TCB6 317 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 IGFBPL1Q8WX77 278 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 MARS2Q96GW9 593 aaKnown RBP8.26□□□□□ -1.09
DDX39A-220ENST00000593008 REEP6Q96HR9 211 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 FAM71F1Q96KD3 344 aaPredicted RBP8.26□□□□□ -1.09
DDX39A-220ENST00000593008 MND1Q9BWT6 205 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 MRPL37Q9BZE1 423 aaKnown RBP8.26□□□□□ -1.09
DDX39A-220ENST00000593008 CXorf56Q9H5V9 222 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 NIPAL2Q9H841 368 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 GPR84Q9NQS5 396 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 CA10Q9NS85 328 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 NUFIP1Q9UHK0 495 aaKnown RBP8.26□□□□□ -1.09
DDX39A-220ENST00000593008 ERGIC3Q9Y282 383 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 SPEF1Q9Y4P9 236 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 USF3Q68DE3 2245 aa8.26□□□□□ -1.09
DDX39A-220ENST00000593008 hCG_38984A0A1B0GV85 526 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 LOC107986453A0A1B0GWG9 222 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 TRIM64BA6NI03 449 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 ICMTO60725 284 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 ZNF254O75437 659 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 ZFPL1O95159 310 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 CD8AP01732 235 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 OR4A8P0C604 315 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 BMP4P12644 408 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 PSMB9P28065 219 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 LIPAP38571 399 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 ALDH3B1P43353 468 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 FABP6P51161 128 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 MMP16P51512 607 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 SPHARQ15513 63 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 ADIPOQQ15848 244 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 TSTQ16762 297 aaKnown RBP8.25□□□□□ -1.09
DDX39A-220ENST00000593008 SPRNQ5BIV9 151 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 LIPKQ5VXJ0 399 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 RNLSQ5VYX0 342 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 SHEQ5VZ18 495 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 OR2T2Q6IF00 324 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 DEGS2Q6QHC5 323 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 TMPRSS11AQ6ZMR5 421 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 COMMD2Q86X83 199 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 ELMOD2Q8IZ81 293 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 LRRC75A-AS1Q8N1F1 130 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 RPS4Y2Q8TD47 263 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 KLF14Q8TD94 323 aaPredicted RBP8.25□□□□□ -1.09
DDX39A-220ENST00000593008 APOBEC3DQ96AK3 386 aaPredicted RBP8.25□□□□□ -1.09
DDX39A-220ENST00000593008 TMIGD2Q96BF3 282 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 TRMT61AQ96FX7 289 aaKnown RBP8.25□□□□□ -1.09
DDX39A-220ENST00000593008 PGLYRP3Q96LB9 341 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 Q96MF0 132 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 NR1H4Q96RI1 486 aaPredicted RBP8.25□□□□□ -1.09
DDX39A-220ENST00000593008 NKX3-1Q99801 234 aaPredicted RBP8.25□□□□□ -1.09
DDX39A-220ENST00000593008 YTHDF1Q9BYJ9 559 aaKnown RBP8.25□□□□□ -1.09
DDX39A-220ENST00000593008 GSX2Q9BZM3 304 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 FGF23Q9GZV9 251 aaPredicted RBP8.25□□□□□ -1.09
DDX39A-220ENST00000593008 CHCHD3Q9NX63 227 aaKnown RBP8.25□□□□□ -1.09
DDX39A-220ENST00000593008 BABAM2Q9NXR7 383 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 SNX5Q9Y5X3 404 aa8.25□□□□□ -1.09
DDX39A-220ENST00000593008 RAI1Q7Z5J4 1906 aaPredicted RBP8.25□□□□□ -1.09
DDX39A-220ENST00000593008 ARID1AO14497 2285 aa8.24□□□□□ -1.09
DDX39A-220ENST00000593008 DSCAMO60469 2012 aa8.24□□□□□ -1.09
DDX39A-220ENST00000593008 IGHV3-64DA0A0J9YX35 117 aa8.24□□□□□ -1.09
DDX39A-220ENST00000593008 ANKRD61A6NGH8 418 aa8.24□□□□□ -1.09
DDX39A-220ENST00000593008 TRIM64CA6NLI5 447 aa8.24□□□□□ -1.09
DDX39A-220ENST00000593008 C3orf80F5H4A9 247 aa8.24□□□□□ -1.09
DDX39A-220ENST00000593008 SMAD7O15105 426 aaKnown RBP8.24□□□□□ -1.09
DDX39A-220ENST00000593008 IGLV3-1P01715 115 aa8.24□□□□□ -1.09
DDX39A-220ENST00000593008 PCSK6P29122 969 aa8.24□□□□□ -1.09
DDX39A-220ENST00000593008 TGFBR2P37173 567 aa8.24□□□□□ -1.09
DDX39A-220ENST00000593008 SOX2P48431 317 aa8.24□□□□□ -1.09
DDX39A-220ENST00000593008 GBX2P52951 348 aaPredicted RBP8.24□□□□□ -1.09
DDX39A-220ENST00000593008 RPS11P62280 158 aaKnown RBP eCLIP8.24□□□□□ -1.09
DDX39A-220ENST00000593008 FAM3AP98173 230 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms