RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ZNF224Q9NZL3 707 aa10.3□□□□□ -0.76
DDX39A-219ENST00000592927 NPAP1Q9NZP6 1156 aa10.3□□□□□ -0.76
DDX39A-219ENST00000592927 ATPIF1Q9UII2 106 aa10.3□□□□□ -0.76
DDX39A-219ENST00000592927 TIMM10BQ9Y5J6 103 aa10.3□□□□□ -0.76
DDX39A-219ENST00000592927 OR4C45A6NMZ5 311 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 A6NNC1 897 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 DEFB108AA8MXU0 73 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 LOC110117498-PIK3R3F6TDL0 507 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 RER1O15258 196 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 SRSF10O75494 262 aaKnown RBP10.29□□□□□ -0.76
DDX39A-219ENST00000592927 GOSR1O95249 250 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 F12P00748 615 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-219ENST00000592927 MMP7P09237 267 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-219ENST00000592927 ZNF32P17041 273 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 PTAFRP25105 342 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 SERPINB10P48595 397 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 IDH3GP51553 393 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-219ENST00000592927 NANOS3P60323 173 aaKnown RBP10.29□□□□□ -0.76
DDX39A-219ENST00000592927 PSMA6P60900 246 aaKnown RBP10.29□□□□□ -0.76
DDX39A-219ENST00000592927 PLP2Q04941 152 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 RAB35Q15286 201 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 DGUOKQ16854 277 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 C3orf36Q3SXR2 165 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 SEZ6L2Q6UXD5 910 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 TMEM91Q6ZNR0 172 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 SPATC1Q76KD6 591 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 OR10S1Q8NGN2 331 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 FGFBP3Q8TAT2 258 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 DYNC2LI1Q8TCX1 351 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 PIK3IP1Q96FE7 263 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 PLPPR2Q96GM1 343 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 ATF6BQ99941 703 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 NOX3Q9HBY0 568 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 FRRS1LQ9P0K9 344 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 CRNNQ9UBG3 495 aaPredicted RBP10.29□□□□□ -0.76
DDX39A-219ENST00000592927 FBXL3Q9UKT7 428 aa10.29□□□□□ -0.76
DDX39A-219ENST00000592927 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.28□□□□□ -0.76
DDX39A-219ENST00000592927 TMEM269A0A1B0GVZ9 245 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 DPRXA6NFQ7 191 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 HAX1O00165 279 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 SGCEO43556 437 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 ARL6IP5O75915 188 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 ZFPL1O95159 310 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 IL1AP01583 271 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 IGKV3-15P01624 115 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 IGLV1-44P01699 117 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 CD3EP07766 207 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 UBCP0CG48 685 aaKnown RBP10.28□□□□□ -0.76
DDX39A-219ENST00000592927 ZNF182P17025 639 aaPredicted RBP10.28□□□□□ -0.76
DDX39A-219ENST00000592927 CD40P25942 277 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 MAPK3P27361 379 aaPredicted RBP10.28□□□□□ -0.76
DDX39A-219ENST00000592927 OTX1P32242 354 aaPredicted RBP10.28□□□□□ -0.76
DDX39A-219ENST00000592927 BSPH1Q075Z2 132 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 ACSM3Q53FZ2 586 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 CCDC92Q53HC0 331 aaPredicted RBP10.28□□□□□ -0.76
DDX39A-219ENST00000592927 WDR38Q5JTN6 314 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 NCMAPQ5T1S8 102 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 TMEM244Q5VVB8 128 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 C22orf42Q6IC83 251 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 UNQ9370/PRO34162Q6UXP9 181 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 ZNF704Q6ZNC4 412 aaPredicted RBP10.28□□□□□ -0.76
DDX39A-219ENST00000592927 PRSS35Q8N3Z0 413 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 ZNF676Q8N7Q3 588 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 NDNFQ8TB73 568 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 GPR148Q8TDV2 347 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 SPTSSAQ969W0 71 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 TRMT61AQ96FX7 289 aaKnown RBP10.28□□□□□ -0.76
DDX39A-219ENST00000592927 TSC22D3Q99576 134 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 KCNS3Q9BQ31 491 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 PDCD1LG2Q9BQ51 273 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 DCUN1D5Q9BTE7 237 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 OR2H1Q9GZK4 316 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 SP140LQ9H930 580 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 PLEK2Q9NYT0 353 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 CCDC59Q9P031 241 aaKnown RBP10.28□□□□□ -0.76
DDX39A-219ENST00000592927 OR52A1Q9UKL2 312 aa10.28□□□□□ -0.76
DDX39A-219ENST00000592927 IGHV1-18A0A0C4DH31 117 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 IQCMA0A1B0GVH7 501 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 ZNF879B4DU55 563 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 SIAH2O43255 324 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 PNPP00491 289 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 SERPINA5P05154 406 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 ISG15P05161 165 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 CELA3BP08861 270 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 CECR9P0C854 216 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 COX5BP10606 129 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 ZNF14P17017 642 aaPredicted RBP10.27□□□□□ -0.77
DDX39A-219ENST00000592927 ACHEP22303 614 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 SOX6P35712 828 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 KIR3DL2P43630 455 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 MTNR1BP49286 362 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 RPS11P62280 158 aaKnown RBP eCLIP10.27□□□□□ -0.77
DDX39A-219ENST00000592927 PSG4Q00888 419 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 Q499Y3 187 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 ZMAT1Q5H9K5 638 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 PABPC1L2AQ5JQF8 200 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 BCL2L15Q5TBC7 163 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 LINC00299Q6ZSB3 139 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 CEACAM19Q7Z692 300 aa10.27□□□□□ -0.77
DDX39A-219ENST00000592927 TPRA1Q86W33 373 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms