RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-228	ENST00000590347		K7EPK0	472 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	P2RX6	O15547	441 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	VIPR2	P41587	438 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	ADPRH	P54922	357 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	POLR2L	P62875	67 aa	Known RBP	13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	BTG2	P78543	158 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	TCEAL5	Q5H9L2	206 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	TMEM215	Q68D42	235 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	ZNF880	Q6PDB4	577 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	KIRREL2	Q6UWL6	708 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	FAM71E2	Q8N5Q1	922 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	RNF128	Q8TEB7	428 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	MRGPRX3	Q96LB0	322 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	SCRT1	Q9BWW7	348 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	SLC25A31	Q9H0C2	315 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	FBRS	Q9HAH7	460 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	ELOVL3	Q9HB03	270 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	STARD10	Q9Y365	291 aa		13.56	□□□□□ -0.24
CIRBP-228	ENST00000590347	IL2RA	P01589	272 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	TACSTD2	P09758	323 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	MPZ	P25189	248 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	DLK1	P80370	383 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	MEP1B	Q16820	701 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	EIF5AL1	Q6IS14	154 aa	Known RBP	13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	LILRA6	Q6PI73	481 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	TMEM64	Q6YI46	380 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	TMEM230	Q96A57	120 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	MS4A6E	Q96DS6	147 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	PRDM7	Q9NQW5	492 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	FREM3	P0C091	2139 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	NID1	P14543	1247 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	TACR3	P29371	465 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	PPM1A	P35813	382 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	PNLIPRP3	Q17RR3	467 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	SLC35D3	Q5M8T2	416 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	ANGPTL5	Q86XS5	388 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	SFTPA1	Q8IWL2	248 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	GPR137C	Q8N3F9	429 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	FIBIN	Q8TAL6	211 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	SLC25A44	Q96H78	314 aa	Predicted RBP	13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	SRMS	Q9H3Y6	488 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	C5orf66	Q9H5L9	145 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	CKLF	Q9UBR5	152 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	APOBEC3B	Q9UH17	382 aa	Known RBP	13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	ANAPC1	Q9H1A4	1944 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	CCDC163	A0A0D9SF12	145 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347		C9J4A7	227 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	TBX19	O60806	448 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	AHSA1	O95433	338 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	DIRAS3	O95661	229 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	LINC00271	P0C7V0	271 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	TUBG1	P23258	451 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	TFPI2	P48307	235 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	MFGE8	Q08431	387 aa	Predicted RBP	13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	RHEB	Q15382	184 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	REEP6	Q96HR9	211 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	NICN1	Q9BSH3	213 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	EPHX3	Q9H6B9	360 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	PPP1R14D	Q9NXH3	145 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	GDE1	Q9NZC3	331 aa		13.55	□□□□□ -0.24
CIRBP-228	ENST00000590347	KLF8	O95600	359 aa	Predicted RBP	13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	PTBP3	O95758	552 aa	Known RBP	13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	CD33	P20138	364 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	CHAT	P28329	748 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	CCR4	P51679	360 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	REEP5	Q00765	189 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	SLC10A1	Q14973	349 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	MLC1	Q15049	377 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	PPA1	Q15181	289 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	IAH1	Q2TAA2	248 aa	Predicted RBP	13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	ZNF684	Q5T5D7	378 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	ABHD17C	Q6PCB6	329 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	OR6X1	Q8NH79	312 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	TIFA	Q96CG3	184 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	ZNF681	Q96N22	645 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	LRRC3B	Q96PB8	259 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	ELOVL1	Q9BW60	279 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	FBXL21	Q9UKT6	434 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	CES1P1	Q9UKY3	287 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	TRANK1	O15050	2925 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	LOC101059948	A0A1B0GTJ6	334 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347		A0A1W2PPV9	198 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	TCF21	O43680	179 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	EN2	P19622	333 aa	Predicted RBP	13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	AADACL3	Q5VUY0	350 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	TMEM268	Q5VZI3	342 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	COX15	Q7KZN9	410 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	YPEL4	Q96NS1	127 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	SPOCK3	Q9BQ16	436 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	NUDT9	Q9BW91	350 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	NMES1	Q9C002	83 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	OR11A1	Q9GZK7	315 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	ZNF700	Q9H0M5	742 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.54	□□□□□ -0.24	3e-7	■■□□□ 13.8
CIRBP-228	ENST00000590347	C19orf12	Q9NSK7	152 aa		13.54	□□□□□ -0.24
CIRBP-228	ENST00000590347	TRBV5-7	A0A0A0MS05	114 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	ZNF724	A8MTY0	619 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	ABHD16A	O95870	558 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	AK1	P00568	194 aa		13.53	□□□□□ -0.24
CIRBP-228	ENST00000590347	ARRB1	P49407	418 aa	Predicted RBP	13.53	□□□□□ -0.24

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