RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 FGGYQ96C11 551 aa8.78□□□□□ -1
VPS25-202ENST00000589219 SFXN2Q96NB2 322 aa8.78□□□□□ -1
VPS25-202ENST00000589219 TMEM246Q9BRR3 403 aa8.78□□□□□ -1
VPS25-202ENST00000589219 ULBP2Q9BZM5 246 aa8.78□□□□□ -1
VPS25-202ENST00000589219 MRPL15Q9P015 296 aaKnown RBP8.78□□□□□ -1
VPS25-202ENST00000589219 FOXD3Q9UJU5 478 aaPredicted RBP8.78□□□□□ -1
VPS25-202ENST00000589219 ZNF222Q9UK12 451 aa8.78□□□□□ -1
VPS25-202ENST00000589219 BOKQ9UMX3 212 aaPredicted RBP8.78□□□□□ -1
VPS25-202ENST00000589219 SLC5A6Q9Y289 635 aa8.78□□□□□ -1
VPS25-202ENST00000589219 NPTNQ9Y639 398 aa8.78□□□□□ -1
VPS25-202ENST00000589219 A0A1B0GTI1 187 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 G3V3Y1 287 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 CDK2AP1O14519 115 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 TERTO14746 1132 aaKnown RBP8.77□□□□□ -1.01
VPS25-202ENST00000589219 TNFSF11O14788 317 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 ARPC1BO15143 372 aaKnown RBP8.77□□□□□ -1.01
VPS25-202ENST00000589219 SMAD9O15198 467 aaKnown RBP8.77□□□□□ -1.01
VPS25-202ENST00000589219 DOK2O60496 412 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 KDM4BO94953 1096 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 GSTT2P0CG29 244 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 UBBP0CG47 229 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 GTF2F2P13984 249 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 CPN1P15169 458 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 KLK2P20151 261 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 CDAP32320 146 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 RCVRNP35243 200 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 THBS4P35443 961 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 HIST1H3AP68431 136 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 MRPS34P82930 218 aaKnown RBP8.77□□□□□ -1.01
VPS25-202ENST00000589219 PMPCAQ10713 525 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 ZMYND11Q15326 602 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 SF3B4Q15427 424 aaKnown RBP eCLIP8.77□□□□□ -1.01
VPS25-202ENST00000589219 TMEM255AQ5JRV8 349 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 PDSS1Q5T2R2 415 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 HIST2H3PS2Q5TEC6 136 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 ZNF468Q5VIY5 522 aaPredicted RBP8.77□□□□□ -1.01
VPS25-202ENST00000589219 SFRP4Q6FHJ7 346 aaPredicted RBP8.77□□□□□ -1.01
VPS25-202ENST00000589219 GLDNQ6ZMI3 551 aaPredicted RBP8.77□□□□□ -1.01
VPS25-202ENST00000589219 ZNF782Q6ZMW2 699 aaPredicted RBP8.77□□□□□ -1.01
VPS25-202ENST00000589219 HIST2H3AQ71DI3 136 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 ABHD12BQ7Z5M8 362 aaPredicted RBP8.77□□□□□ -1.01
VPS25-202ENST00000589219 COMMD2Q86X83 199 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 C20orf196Q8IYI0 205 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 CLEC1AQ8NC01 280 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 OR2V1Q8NHB1 315 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 OR51E1Q8TCB6 317 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 NABP1Q96AH0 204 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 ADAT3Q96EY9 351 aaPredicted RBP8.77□□□□□ -1.01
VPS25-202ENST00000589219 IP6K3Q96PC2 410 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 ZNF385AQ96PM9 386 aaKnown RBP8.77□□□□□ -1.01
VPS25-202ENST00000589219 ZNF416Q9BWM5 594 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 SRXN1Q9BYN0 137 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 OR10A4Q9H209 315 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 KCNK15Q9H427 330 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 NOX3Q9HBY0 568 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 NKIRAS2Q9NYR9 191 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 UPB1Q9UBR1 384 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 B4GALT7Q9UBV7 327 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 SCP2D1Q9UJQ7 156 aa8.77□□□□□ -1.01
VPS25-202ENST00000589219 MRPS18BQ9Y676 258 aaKnown RBP8.77□□□□□ -1.01
VPS25-202ENST00000589219 A0A0G2JMM0 328 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 A0A0U1RQV5 110 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 A0A1W2PPB8 328 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 A0A1W2PRS3 328 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 UBE2QL1A1L167 161 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 KIR3DP1A8MWS1 328 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 PYCARD-AS1I3L0S3 204 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 RER1O15258 196 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 CREBL2O60519 120 aaPredicted RBP8.76□□□□□ -1.01
VPS25-202ENST00000589219 LMX1BO60663 402 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 ICMTO60725 284 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 SNAPC5O75971 98 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 IGLV3-1P01715 115 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 MELTFP08582 738 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 PTHLHP12272 177 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 POU3F2P20265 443 aaPredicted RBP8.76□□□□□ -1.01
VPS25-202ENST00000589219 CNR1P21554 472 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 S100A1P23297 94 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 PRKXP51817 358 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 MFAP5Q13361 173 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 ENDOGQ14249 297 aaKnown RBP8.76□□□□□ -1.01
VPS25-202ENST00000589219 RAB35Q15286 201 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 SGCAQ16586 387 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 B3GNTL1Q67FW5 361 aaPredicted RBP8.76□□□□□ -1.01
VPS25-202ENST00000589219 ZNF626Q68DY1 528 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 STEAP1BQ6NZ63 245 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 Q6ZSR3 168 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 ZNF627Q7L945 461 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 BIVMQ86UB2 503 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 GGNQ86UU5 652 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 GABRG1Q8N1C3 465 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 GPR137CQ8N3F9 429 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 SPICQ8N5J4 248 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 OR4D6Q8NGJ1 314 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 OR13C9Q8NGT0 318 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 ASB13Q8WXK3 278 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 SPTSSAQ969W0 71 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 C10orf35Q96D05 121 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 PGAM5Q96HS1 289 aa8.76□□□□□ -1.01
VPS25-202ENST00000589219 ADGRG7Q96K78 797 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms