RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 NME4O00746 187 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 NPFFO15130 113 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 FBP1P09467 338 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 VSIG10L2P0DP72 767 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 EFNB2P52799 333 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 ZBED5Q49AG3 693 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 ZBTB37Q5TC79 503 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 REC114Q7Z4M0 266 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 VTCN1Q7Z7D3 282 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 KLHDC1Q8N7A1 406 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 FAM216BQ8N7L0 139 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 CELF2-AS1Q8N7Q2 184 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 ERGIC1Q969X5 290 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 ADAT1Q9BUB4 502 aaKnown RBP12.35□□□□□ -0.43
SF3A2-204ENST00000589118 FAM107BQ9H098 131 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 MMP28Q9H239 520 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 SRA1Q9HD15 236 aaKnown RBP12.35□□□□□ -0.43
SF3A2-204ENST00000589118 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.35□□□□□ -0.43
SF3A2-204ENST00000589118 ARL2BPQ9Y2Y0 163 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 IER3IP1Q9Y5U9 82 aa12.35□□□□□ -0.43
SF3A2-204ENST00000589118 TRAV38-1A0A0B4J264 116 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 MEIOCA2RUB1 952 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 MEGF11A6BM72 1044 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 H3BUX3 64 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 J3QW42 95 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 MPIG6BO95866 241 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 SELLP14151 372 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 NUDT2P50583 147 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 SLC7A2P52569 658 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 SELENOWP63302 87 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 ZNF92Q03936 586 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 LIPEQ05469 1076 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 KCNMB1Q16558 191 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 SNAI3Q3KNW1 292 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 KRTAP27-1Q3LI81 207 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 PGAP1Q75T13 922 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 GJC3Q8NFK1 279 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 CFHR4Q92496 578 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 PHF21AQ96BD5 680 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 FAM46AQ96IP4 442 aaKnown RBP12.34□□□□□ -0.43
SF3A2-204ENST00000589118 FNDC11Q9BVV2 318 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 HDHD2Q9H0R4 259 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 PPP1R3EQ9H7J1 279 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 NMNAT1Q9HAN9 279 aaPredicted RBP12.34□□□□□ -0.43
SF3A2-204ENST00000589118 NECAP2Q9NVZ3 263 aa12.34□□□□□ -0.43
SF3A2-204ENST00000589118 A0A1B0GVI7 797 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 hCG_1807616A0A1W2PRN6 198 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 A6NLC8 198 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 CD300LBA8K4G0 201 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 PTP4A3O75365 173 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 CD28P10747 220 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 AMY2BP19961 511 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 SAA4P35542 130 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 FXYD6P3P58550 94 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 GMFBP60983 142 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 IKZF1Q13422 519 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 HABP2Q14520 560 aaPredicted RBP12.33□□□□□ -0.44
SF3A2-204ENST00000589118 TRAM2Q15035 370 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 FOXB2Q5VYV0 432 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 ZNF730Q6ZMV8 503 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 C11orf53Q8IXP5 236 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 LY6G5BQ8NDX9 201 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 OR5T2Q8NGG2 359 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 PPP1R14AQ96A00 147 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 PITX2Q99697 317 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 SPAG4Q9NPE6 437 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 N6AMT1Q9Y5N5 214 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 KPTNQ9Y664 436 aa12.33□□□□□ -0.44
SF3A2-204ENST00000589118 DCTN3O75935 186 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 LHBP01229 141 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 RPS27P42677 84 aaKnown RBP12.32□□□□□ -0.44
SF3A2-204ENST00000589118 GSK3BP49841 420 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 PSME3P61289 254 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 KCNJ8Q15842 424 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 WDR38Q5JTN6 314 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 SLC18B1Q6NT16 456 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 TMPRSS11FQ6ZWK6 438 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 MBOAT2Q6ZWT7 520 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 MRPL21Q7Z2W9 205 aaKnown RBP12.32□□□□□ -0.44
SF3A2-204ENST00000589118 WDR86Q86TI4 376 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 OFCC1Q8IZS5 231 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 LZICQ8WZA0 190 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 TNFRSF14Q92956 283 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 SSX3Q99909 188 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 FN3KQ9H479 309 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 PNRC2Q9NPJ4 139 aaKnown RBP12.32□□□□□ -0.44
SF3A2-204ENST00000589118 NRIP3Q9NQ35 241 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 ATPIF1Q9UII2 106 aa12.32□□□□□ -0.44
SF3A2-204ENST00000589118 IGLV1-36A0A0B4J1U3 117 aa12.31□□□□□ -0.44
SF3A2-204ENST00000589118 HTR3EA5X5Y0 456 aa12.31□□□□□ -0.44
SF3A2-204ENST00000589118 CXCR6O00574 342 aa12.31□□□□□ -0.44
SF3A2-204ENST00000589118 ACOT8O14734 319 aa12.31□□□□□ -0.44
SF3A2-204ENST00000589118 AHCYL1O43865 530 aa12.31□□□□□ -0.44
SF3A2-204ENST00000589118 PPP1R3DO95685 299 aa12.31□□□□□ -0.44
SF3A2-204ENST00000589118 PTBP3O95758 552 aaKnown RBP12.31□□□□□ -0.44
SF3A2-204ENST00000589118 ECDO95905 644 aaPredicted RBP12.31□□□□□ -0.44
SF3A2-204ENST00000589118 PAHP00439 452 aa12.31□□□□□ -0.44
SF3A2-204ENST00000589118 SDHAP31040 664 aa12.31□□□□□ -0.44
SF3A2-204ENST00000589118 TRAP1Q12931 704 aaKnown RBP12.31□□□□□ -0.44
SF3A2-204ENST00000589118 MALLQ13021 153 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms