RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 FAM3DQ96BQ1 224 aa7.68□□□□□ -1.18
SMAD4-206ENST00000588860 HAVCR1Q96D42 359 aa7.68□□□□□ -1.18
SMAD4-206ENST00000588860 ADAT3Q96EY9 351 aaPredicted RBP7.68□□□□□ -1.18
SMAD4-206ENST00000588860 ZNF799Q96GE5 643 aa7.68□□□□□ -1.18
SMAD4-206ENST00000588860 WDYHV1Q96HA8 205 aa7.68□□□□□ -1.18
SMAD4-206ENST00000588860 SOX7Q9BT81 388 aa7.68□□□□□ -1.18
SMAD4-206ENST00000588860 ATG5Q9H1Y0 275 aa7.68□□□□□ -1.18
SMAD4-206ENST00000588860 AUNIPQ9H7T9 357 aa7.68□□□□□ -1.18
SMAD4-206ENST00000588860 ZDHHC11Q9H8X9 412 aa7.68□□□□□ -1.18
SMAD4-206ENST00000588860 PLEKHA1Q9HB21 404 aa7.68□□□□□ -1.18
SMAD4-206ENST00000588860 PARPBPQ9NWS1 579 aa7.68□□□□□ -1.18
SMAD4-206ENST00000588860 ZNF319Q9P2F9 582 aa7.68□□□□□ -1.18
SMAD4-206ENST00000588860 TEP1Q99973 2627 aaKnown RBP7.68□□□□□ -1.18
SMAD4-206ENST00000588860 CFAP46Q8IYW2 2715 aa7.68□□□□□ -1.18
SMAD4-206ENST00000588860 TMEM272A0A1B0GTI8 110 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 C5orf63A6NC05 138 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 OR6C65A6NJZ3 312 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 SLC22A20A6NK97 555 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 SULT1B1O43704 296 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 SYNGR3O43761 229 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 FARS2O95363 451 aaKnown RBP7.67□□□□□ -1.18
SMAD4-206ENST00000588860 YES1P07947 543 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 ERCC1P07992 297 aaPredicted RBP7.67□□□□□ -1.18
SMAD4-206ENST00000588860 PATE4P0C8F1 98 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 ABOP16442 354 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 ZNF24P17028 368 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 RAB3AP20336 220 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 KIR2DL3P43628 341 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 HTR5AP47898 357 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 PTH2RP49190 550 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 SRP9P49458 86 aaKnown RBP7.67□□□□□ -1.18
SMAD4-206ENST00000588860 TPTEP56180 551 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 ARF1P84077 181 aaKnown RBP7.67□□□□□ -1.18
SMAD4-206ENST00000588860 ECH1Q13011 328 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 C2orf76Q3KRA6 126 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 C9orf135Q5VTT2 229 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 FAM166AQ6J272 317 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 KRT74Q7RTS7 529 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 P4HA3Q7Z4N8 544 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 ADGRE4PQ86SQ3 457 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 NAA40Q86UY6 237 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 SIAH3Q8IW03 269 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 SKA3Q8IX90 412 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 ZNF100Q8IYN0 542 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 TOMM5Q8N4H5 51 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 OR52N4Q8NGI2 321 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 OR5D14Q8NGL3 314 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 OR13C9Q8NGT0 318 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 SMIM4Q8WVI0 70 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 GCDHQ92947 438 aaPredicted RBP7.67□□□□□ -1.18
SMAD4-206ENST00000588860 PHF21AQ96BD5 680 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 APH1AQ96BI3 265 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 FOXRED1Q96CU9 486 aaPredicted RBP7.67□□□□□ -1.18
SMAD4-206ENST00000588860 ZC3HAV1LQ96H79 300 aaKnown RBP7.67□□□□□ -1.18
SMAD4-206ENST00000588860 LYZL4Q96KX0 146 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 SORCS2Q96PQ0 1159 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 NEURL2Q9BR09 285 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 OR2H1Q9GZK4 316 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 WNT5BQ9H1J7 359 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 OR10A2Q9H208 303 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 RNF121Q9H920 327 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 RNF122Q9H9V4 155 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 BCO1Q9HAY6 547 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 TMEM138Q9NPI0 162 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 SLC17A5Q9NRA2 495 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 SLC7A10Q9NS82 523 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 RBFOX1Q9NWB1 397 aaKnown RBP7.67□□□□□ -1.18
SMAD4-206ENST00000588860 UPB1Q9UBR1 384 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 TIMM10BQ9Y5J6 103 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 KCNMB2Q9Y691 235 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 CACNG2Q9Y698 323 aa7.67□□□□□ -1.18
SMAD4-206ENST00000588860 URB1O60287 2271 aaKnown RBP7.67□□□□□ -1.18
SMAD4-206ENST00000588860 CELSR3Q9NYQ7 3312 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 A0A0U1RQV5 110 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 LOC390937A0A1W2PQ73 354 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 OR6C6A6NF89 314 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 CENPXA8MT69 81 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 E9PLN8 166 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 GABARAPH6UMI1 98 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 KLK10O43240 276 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 EFSO43281 561 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 XRCC3O43542 346 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 CTAG2O75638 210 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 CEACAM4O75871 244 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 CD37P11049 281 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 CPN1P15169 458 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 ARSBP15848 533 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 CRYGSP22914 178 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 OTX1P32242 354 aaPredicted RBP7.66□□□□□ -1.18
SMAD4-206ENST00000588860 THBS4P35443 961 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 GDNFP39905 211 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 MNDAP41218 407 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 PSG4Q00888 419 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 SRSF1Q07955 248 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMAD4-206ENST00000588860 STK11Q15831 433 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 RSPO1Q2MKA7 263 aaPredicted RBP7.66□□□□□ -1.18
SMAD4-206ENST00000588860 SNAI3Q3KNW1 292 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 SLC36A2Q495M3 483 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 C1orf100Q5SVJ3 147 aa7.66□□□□□ -1.18
SMAD4-206ENST00000588860 SFRP5Q5T4F7 317 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms