RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 H1F0P07305 194 aaKnown RBP11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 HIST1H1CP16403 213 aaKnown RBP11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 RPS27P42677 84 aaKnown RBP11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 RPS6KA3P51812 740 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 LIPEQ05469 1076 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 POU4F2Q12837 409 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 ECH1Q13011 328 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 OR8B8Q15620 311 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 KCNJ8Q15842 424 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 PCK2Q16822 640 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 RFX4Q33E94 735 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 GLYATL3Q5SZD4 288 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 DHRS7BQ6IAN0 325 aaPredicted RBP11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 DNM1P34Q6PK57 102 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 SMARCD3Q6STE5 483 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 MRPL21Q7Z2W9 205 aaKnown RBP11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 FAM216BQ8N7L0 139 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 BOLLQ8N9W6 283 aaKnown RBP11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 SCCPDHQ8NBX0 429 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 SPRYD4Q8WW59 207 aaPredicted RBP11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 ZNRF4Q8WWF5 429 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 CFHR4Q92496 578 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 ZNF799Q96GE5 643 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 AJUBAQ96IF1 538 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 DDOQ99489 341 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 PITX2Q99697 317 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 NDEL1Q9GZM8 345 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 SLC22A4Q9H015 551 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 DPAGT1Q9H3H5 408 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 TRIM36Q9NQ86 728 aa11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 MRPL15Q9P015 296 aaKnown RBP11.31□□□□□ -0.6
CLPTM1-208ENST00000588274 PLXNB1O43157 2135 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 COL7A1Q02388 2944 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 IGHV3OR15-7A0A075B7D8 119 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 A0A1B0GVI7 797 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 ECDO95905 644 aaPredicted RBP11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 OPN1MWP04001 364 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 OPN1MW2P0DN77 364 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 OPN1MW3P0DN78 364 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 SELLP14151 372 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 GSK3BP49841 420 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 MALLQ13021 153 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 KLRD1Q13241 179 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 MAPRE2Q15555 327 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 WDR38Q5JTN6 314 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 LYPD4Q6UWN0 246 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 PNKDQ8N490 385 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 OR56B2PQ8NGI1 322 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 PPP1R35Q8TAP8 253 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 FANK1Q8TC84 345 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 LRTOMTQ8WZ04 291 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 SEH1LQ96EE3 360 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 ERMAPQ96PL5 475 aaPredicted RBP11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 OR52D1Q9H346 318 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 PPP1R3EQ9H7J1 279 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 CNTD2Q9H8S5 307 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 SRA1Q9HD15 236 aaKnown RBP11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 RPRD1BQ9NQG5 326 aaKnown RBP11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 SIRT7Q9NRC8 400 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 GID8Q9NWU2 228 aa11.3□□□□□ -0.6
CLPTM1-208ENST00000588274 DNAH9Q9NYC9 4486 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 HMGB1P1B2RPK0 211 aaPredicted RBP11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 DIRAS1O95057 198 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 SEMG1P04279 462 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 FBP1P09467 338 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 CSF1P09603 554 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 NCK1P16333 377 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 CENPAP49450 140 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 SLC7A2P52569 658 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 EFNB2P52799 333 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 FGD3Q5JSP0 725 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 SLC35E4Q6ICL7 350 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 CRIP3Q6Q6R5 217 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 FKBP9P1Q75LS8 142 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 ARPINQ7Z6K5 226 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 SDR9C7Q8NEX9 313 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 OR4K13Q8NH42 304 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 C8orf46Q8TAG6 207 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 ST8SIA4Q92187 359 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 SPSB4Q96A44 273 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 FBLN5Q9UBX5 448 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 SIGLEC9Q9Y336 463 aa11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 NOP16Q9Y3C1 178 aaKnown RBP11.29□□□□□ -0.6
CLPTM1-208ENST00000588274 ACOT8O14734 319 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 NPFFO15130 113 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 RHCEP18577 417 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 SAA4P35542 130 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 TGFBR2P37173 567 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 TPTEP56180 551 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 CSNK2BP67870 215 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 STUMQ69YW2 141 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 HCP5Q6MZN7 132 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 WDR82Q6UXN9 313 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 RRM2BQ7LG56 351 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 NPRL2Q8WTW4 380 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 C17orf50Q8WW18 174 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 DMRTB1Q96MA1 342 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 CCL13Q99616 98 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 DCTN5Q9BTE1 182 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 TLNRD1Q9H1K6 362 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms