RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 TUBG1P23258 451 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 GABRA5P31644 462 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 TTKP33981 857 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ZNF92Q03936 586 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 MALLQ13021 153 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 TRAM1Q15629 374 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 YIF1BQ5BJH7 314 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 BEX5Q5H9J7 111 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 UNQ9370/PRO34162Q6UXP9 181 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 Q6ZSR3 168 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 RFPL4BQ6ZWI9 263 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 PLPP7Q8NBV4 271 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 RGP1Q92546 391 aaPredicted RBP14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 TMEM203Q969S6 136 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 REEP6Q96HR9 211 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SOX7Q9BT81 388 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 TMED9Q9BVK6 235 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 REPIN1Q9BWE0 567 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 BCL2L14Q9BZR8 327 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 OR51B6Q9H340 312 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 POFUT1Q9H488 388 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 GPR84Q9NQS5 396 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 TUBG2Q9NRH3 451 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ZNF391Q9UJN7 358 aa14.08□□□□□ -0.16
CDK5RAP3-228ENST00000583363 CCDC168Q8NDH2 2452 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 DEFB108AA8MXU0 73 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ABCD4O14678 606 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SIAH2O43255 324 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SYT7O43581 403 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 PSMA1P25786 263 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 LOXP28300 417 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 CRYBB2P43320 205 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 PPP1CBP62140 327 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 NKX6-1P78426 367 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SPOCK1Q08629 439 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 DOK3Q7L591 496 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 OR1J1Q8NGS3 322 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 OR10AC1Q8NH08 325 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 OR2AE1Q8NHA4 323 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 GPR148Q8TDV2 347 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 AKAP1Q92667 903 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 FUNDC2Q9BWH2 189 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 PTTG3PQ9NZH4 202 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 HHLA2Q9UM44 414 aa14.07□□□□□ -0.16
CDK5RAP3-228ENST00000583363 TRBV5-5A0A0J9YX44 114 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 A0A1B0GVI7 797 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 LOC107986453A0A1B0GWG9 222 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 TRDV1A0A1B0GX56 115 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 LOC390937A0A1W2PQ73 354 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ATP6V1G2-DDX39BF2Z307 99 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 H3BSA7 217 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 GPX5O75715 221 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SC5DO75845 299 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SERPINA3P01011 423 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 HLA-DPB1P04440 258 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 CD3EP07766 207 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 COX6B1P14854 86 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 CFL1P23528 166 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 GADD45AP24522 165 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 GLRXP35754 106 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 MAGEB1P43366 347 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 FAM3AP98173 230 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 FABP5Q01469 135 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 GK2Q14410 553 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 DAZAP2Q15038 168 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ACSM3Q53FZ2 586 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 CD200R1LQ6Q8B3 271 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 MEX3BQ6ZN04 569 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 TMEM91Q6ZNR0 172 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ANKRD13BQ86YJ7 626 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ZNF295-AS1Q8N0V1 137 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 PIAS4Q8N2W9 510 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 CCDC54Q8NEL0 328 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 NUP37Q8NFH4 326 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 OR51A4Q8NGJ6 313 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 OR13C5Q8NGS8 318 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 OR14K1Q8NGZ2 314 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SLC25A40Q8TBP6 338 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 MARS2Q96GW9 593 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 RADILQ96JH8 1075 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SPOCK3Q9BQ16 436 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 OR51E2Q9H255 320 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 STUB1Q9UNE7 303 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 MED13LQ71F56 2210 aa14.06□□□□□ -0.16
CDK5RAP3-228ENST00000583363 DPPA5A6NC42 116 aa14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 H3BSH0 61 aa14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 GALP22466 123 aa14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ERVS71-1P61550 626 aa14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 HLXQ14774 488 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 GFOD2Q3B7J2 385 aa14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 GPR107Q5VW38 600 aa14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SLC22A25Q6T423 547 aa14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 FBXW12Q6X9E4 464 aa14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 COMMD2Q86X83 199 aa14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ITFG2Q969R8 447 aa14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 CMBLQ96DG6 245 aa14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 FAM71F1Q96KD3 344 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 OR2J1Q9GZK6 312 aa14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 OPA3Q9H6K4 179 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms