RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 RHBDD3Q9Y3P4 386 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 NCOR2Q9Y618 2525 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 FRYQ5TBA9 3013 aa19.89■□□□□ 0.77
CCDC47-204ENST00000582252 SGCEO43556 437 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 KDM4BO94953 1096 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 ALDOBP05062 364 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 YES1P07947 543 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 PTHLHP12272 177 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 THBS4P35443 961 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 CLDN18P56856 261 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 MAB21L1Q13394 359 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 GFOD2Q3B7J2 385 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 GALNTL5Q7Z4T8 443 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 OR52H1Q8NGJ2 320 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 OR14K1Q8NGZ2 314 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 FBXO17Q96EF6 278 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 DMRTB1Q96MA1 342 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 FOXB1Q99853 325 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 OR10A2Q9H208 303 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 PARPBPQ9NWS1 579 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 FBLN5Q9UBX5 448 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 SSUH2Q9Y2M2 353 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 NOSIPQ9Y314 301 aaKnown RBP19.88■□□□□ 0.77
CCDC47-204ENST00000582252 LOC400499M0QZD8 3231 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 ANKRD11Q6UB99 2663 aaPredicted RBP19.88■□□□□ 0.77
CCDC47-204ENST00000582252 CFAP47Q6ZTR5 3102 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 OR6C65A6NJZ3 312 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 GMDSO60547 372 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 PEX14O75381 377 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 LPLP06858 475 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 ZNF708P17019 499 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 RFC3P40938 356 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 NKX2-5P52952 324 aaPredicted RBP19.88■□□□□ 0.77
CCDC47-204ENST00000582252 MRPS15P82914 257 aaKnown RBP19.88■□□□□ 0.77
CCDC47-204ENST00000582252 PMPCAQ10713 525 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 STK11Q15831 433 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 FAM189A2Q15884 450 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 NRN1LQ496H8 165 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 SFRP4Q6FHJ7 346 aaPredicted RBP19.88■□□□□ 0.77
CCDC47-204ENST00000582252 DRAM2Q6UX65 266 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 ALKBH3Q96Q83 286 aaPredicted RBP19.88■□□□□ 0.77
CCDC47-204ENST00000582252 LINC00470Q9BZP3 86 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 OR51J1Q9H342 316 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 GHITMQ9H3K2 345 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 ZNF552Q9H707 407 aaPredicted RBP19.88■□□□□ 0.77
CCDC47-204ENST00000582252 ZNF319Q9P2F9 582 aa19.88■□□□□ 0.77
CCDC47-204ENST00000582252 MRPL33O75394 65 aaKnown RBP19.87■□□□□ 0.77
CCDC47-204ENST00000582252 DHRS3O75911 302 aa19.87■□□□□ 0.77
CCDC47-204ENST00000582252 FARS2O95363 451 aaKnown RBP19.87■□□□□ 0.77
CCDC47-204ENST00000582252 ABOP16442 354 aa19.87■□□□□ 0.77
CCDC47-204ENST00000582252 CCL11P51671 97 aa19.87■□□□□ 0.77
CCDC47-204ENST00000582252 CD276Q5ZPR3 534 aa19.87■□□□□ 0.77
CCDC47-204ENST00000582252 AWAT2Q6E213 333 aa19.87■□□□□ 0.77
CCDC47-204ENST00000582252 FGD2Q7Z6J4 655 aa19.87■□□□□ 0.77
CCDC47-204ENST00000582252 NOXA1Q86UR1 476 aa19.87■□□□□ 0.77
CCDC47-204ENST00000582252 GPX8Q8TED1 209 aa19.87■□□□□ 0.77
CCDC47-204ENST00000582252 ABHD3Q8WU67 409 aa19.87■□□□□ 0.77
CCDC47-204ENST00000582252 ZNF837Q96EG3 531 aaPredicted RBP19.87■□□□□ 0.77
CCDC47-204ENST00000582252 NKX3-1Q99801 234 aaPredicted RBP19.87■□□□□ 0.77
CCDC47-204ENST00000582252 SLC6A15Q9H2J7 730 aa19.87■□□□□ 0.77
CCDC47-204ENST00000582252 GPR35Q9HC97 309 aa19.87■□□□□ 0.77
CCDC47-204ENST00000582252 KCNMB2Q9Y691 235 aa19.87■□□□□ 0.77
CCDC47-204ENST00000582252 ACTL6AO96019 429 aa19.86■□□□□ 0.77
CCDC47-204ENST00000582252 HCKP08631 526 aa19.86■□□□□ 0.77
CCDC47-204ENST00000582252 AKAIN1P0CW23 69 aa19.86■□□□□ 0.77
CCDC47-204ENST00000582252 PPIAP62937 165 aaKnown RBP19.86■□□□□ 0.77
CCDC47-204ENST00000582252 SRYQ05066 204 aa19.86■□□□□ 0.77
CCDC47-204ENST00000582252 GSG1Q2KHT4 349 aa19.86■□□□□ 0.77
CCDC47-204ENST00000582252 CEACAM16Q2WEN9 425 aa19.86■□□□□ 0.77
CCDC47-204ENST00000582252 Q6ZSR3 168 aa19.86■□□□□ 0.77
CCDC47-204ENST00000582252 OR2W3Q7Z3T1 314 aa19.86■□□□□ 0.77
CCDC47-204ENST00000582252 BIVMQ86UB2 503 aa19.86■□□□□ 0.77
CCDC47-204ENST00000582252 TMEM178AQ8NBL3 297 aa19.86■□□□□ 0.77
CCDC47-204ENST00000582252 GIMAP1Q8WWP7 306 aa19.86■□□□□ 0.77
CCDC47-204ENST00000582252 PP6455Q8WZ26 134 aa19.86■□□□□ 0.77
CCDC47-204ENST00000582252 FYTTD1Q96QD9 318 aaKnown RBP19.86■□□□□ 0.77
CCDC47-204ENST00000582252 NUDT16L1Q9BRJ7 211 aaKnown RBP19.86■□□□□ 0.77
CCDC47-204ENST00000582252 TRAF4Q9BUZ4 470 aaPredicted RBP19.86■□□□□ 0.77
CCDC47-204ENST00000582252 RNF122Q9H9V4 155 aa19.86■□□□□ 0.77
CCDC47-204ENST00000582252 V9GYS6 101 aa19.86■□□□□ 0.77
CCDC47-204ENST00000582252 NCOA6Q14686 2063 aaPredicted RBP19.86■□□□□ 0.77
CCDC47-204ENST00000582252 CELA3AP09093 270 aa19.85■□□□□ 0.77
CCDC47-204ENST00000582252 UBBP0CG47 229 aa19.85■□□□□ 0.77
CCDC47-204ENST00000582252 NTF4P34130 210 aa19.85■□□□□ 0.77
CCDC47-204ENST00000582252 GSK3AP49840 483 aa19.85■□□□□ 0.77
CCDC47-204ENST00000582252 ARG2P78540 354 aa19.85■□□□□ 0.77
CCDC47-204ENST00000582252 SPACA3Q8IXA5 215 aa19.85■□□□□ 0.77
CCDC47-204ENST00000582252 OR1F12Q8NHA8 337 aa19.85■□□□□ 0.77
CCDC47-204ENST00000582252 HAS2Q92819 552 aa19.85■□□□□ 0.77
CCDC47-204ENST00000582252 DACT3Q96B18 629 aaPredicted RBP19.85■□□□□ 0.77
CCDC47-204ENST00000582252 BEX2Q9BXY8 128 aa19.85■□□□□ 0.77
CCDC47-204ENST00000582252 PRRG4Q9BZD6 226 aa19.85■□□□□ 0.77
CCDC47-204ENST00000582252 ACKR4Q9NPB9 350 aa19.85■□□□□ 0.77
CCDC47-204ENST00000582252 ZNF107Q9UII5 783 aaPredicted RBP19.85■□□□□ 0.77
CCDC47-204ENST00000582252 TIMM10BQ9Y5J6 103 aa19.85■□□□□ 0.77
CCDC47-204ENST00000582252 DMXL2Q8TDJ6 3036 aa19.85■□□□□ 0.77
CCDC47-204ENST00000582252 LAMA5O15230 3695 aa19.85■□□□□ 0.77
CCDC47-204ENST00000582252 RRP8O43159 456 aaKnown RBP19.85■□□□□ 0.77
CCDC47-204ENST00000582252 ALX3O95076 343 aa19.85■□□□□ 0.77
CCDC47-204ENST00000582252 GTF2F2P13984 249 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms