RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ZNF407Q9C0G0 2248 aa1.15□□□□□ -2.23
SMCHD1-206ENST00000581631 IGHV3OR16-9A0A0B4J2B5 98 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 E7EQL1 145 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 SIRPB1O00241 398 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 CPLX1O14810 134 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 EIF3HO15372 352 aaKnown RBP eCLIP1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 TGM6O95932 706 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 UQCRFS1P1P0C7P4 283 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 OR1E1P30953 314 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 RAB7AP51149 207 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 SELENBP1Q13228 472 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 TRAM2Q15035 370 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 SSX2Q16385 188 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 OPN5Q6U736 354 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 FAM131AQ6UXB0 335 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 LINC00469Q8N7U9 141 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 C19orf18Q8NEA5 215 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 RXFP4Q8TDU9 374 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 OR4K3Q96R72 315 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 KCNS3Q9BQ31 491 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 ZNF442Q9H7R0 627 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 TRIM45Q9H8W5 580 aaPredicted RBP1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 RRAGDQ9NQL2 400 aaPredicted RBP1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 PARP11Q9NR21 331 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 ASF1BQ9NVP2 202 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 SLC39A1Q9NY26 324 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 RWDD2AQ9UIY3 292 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 FHOD3Q2V2M9 1422 aa1.14□□□□□ -2.23
SMCHD1-206ENST00000581631 OR2AG2A6NM03 316 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 GABRPO00591 440 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 SCO1O75880 301 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 FSTL3O95633 263 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 IGLV2-8P01709 118 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 RRM2P31350 389 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 ACOT2P49753 483 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 RAB9AP51151 201 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 SLC9A3R2Q15599 337 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 ZNF829Q3KNS6 432 aaPredicted RBP1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 SP6Q3SY56 376 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 HSP90AB3PQ58FF7 597 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 PRAMEF20Q5VT98 475 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 ZFAND6Q6FIF0 208 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 APOBEC3HQ6NTF7 200 aaKnown RBP1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 CD300LGQ6UXG3 332 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 SLC22A9Q8IVM8 553 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 ARL6IP6Q8N6S5 226 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 LRRC75AQ8NAA5 344 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 Q8NDZ9 215 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 OR7G2Q8NG99 324 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 OR56B2PQ8NGI1 322 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 OR4A4PQ8NGN8 299 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 OR13C2Q8NGS9 318 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 LYPD6BQ8NI32 183 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 CMTM2Q8TAZ6 248 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 ACMSDQ8TDX5 336 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 TOLLIPQ9H0E2 274 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 TMEM38AQ9H6F2 299 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 DYRK4Q9NR20 520 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 RGS18Q9NS28 235 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 DCAF16Q9NXF7 216 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 HES2Q9Y543 173 aa1.13□□□□□ -2.23
SMCHD1-206ENST00000581631 THADAQ6YHU6 1953 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 A6NDN8 102 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 SDHAF1A6NFY7 115 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 NDUFAB1O14561 156 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 CTRB1P17538 263 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 NELFEP18615 380 aaKnown RBP1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 USF1P22415 310 aaPredicted RBP1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 HLA-DMAP28067 261 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 HTR1DP28221 377 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 ZNF121P58317 390 aaPredicted RBP1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 RAB10P61026 200 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 ALKBH6Q3KRA9 238 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 CEP55Q53EZ4 464 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 GCSAMLQ5JQS6 135 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 AMMECR1LQ6DCA0 310 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 C22orf42Q6IC83 251 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 FAM43BQ6ZT52 329 aaPredicted RBP1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 FAM228AQ86W67 206 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 DRAM1Q8N682 238 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 LY6G5BQ8NDX9 201 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 SLC26A10Q8NG04 563 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 OR5K2Q8NHB8 316 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 ENKURQ8TC29 256 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 ZNF606Q8WXB4 792 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 CDS1Q92903 461 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 RERGQ96A58 199 aaPredicted RBP1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 BTN2A3PQ96KV6 586 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 NT5C3AQ9H0P0 336 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 DUSP21Q9H596 190 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 BEX1Q9HBH7 125 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 AGPAT4Q9NRZ5 378 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 MTCH1Q9NZJ7 389 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 SLC17A4Q9Y2C5 497 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 ZBED9Q6R2W3 1325 aa1.12□□□□□ -2.23
SMCHD1-206ENST00000581631 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 BAZ2AQ9UIF9 1905 aaKnown RBP1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 SMCO3A2RU48 225 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 A8MWL6 223 aa1.11□□□□□ -2.23
SMCHD1-206ENST00000581631 CENPBD1B2RD01 187 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms