RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 OR9Q1Q8NGQ5 310 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 OR6X1Q8NH79 312 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 IPCEF1Q8WWN9 437 aaPredicted RBP9.05□□□□□ -0.96
TOP3A-210ENST00000580713 C11orf40Q8WZ69 217 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 GTF3AQ92664 365 aaKnown RBP9.05□□□□□ -0.96
TOP3A-210ENST00000580713 PTP4A1Q93096 173 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 ZNF75AQ96N20 296 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 OR2M2Q96R28 347 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 DDOQ99489 341 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 SLC30A2Q9BRI3 323 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 ALG12Q9BV10 488 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 EMC6Q9BV81 110 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 HCAR1Q9BXC0 346 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 NMNAT2Q9BZQ4 307 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 OR51V1Q9H2C8 321 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 B3GAT2Q9NPZ5 323 aa9.05□□□□□ -0.96
TOP3A-210ENST00000580713 RPRD1BQ9NQG5 326 aaKnown RBP9.05□□□□□ -0.96
TOP3A-210ENST00000580713 VSX1Q9NZR4 365 aaPredicted RBP9.05□□□□□ -0.96
TOP3A-210ENST00000580713 MDFIC2A0A1B0GVS7 189 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 EFCAB10A6NFE3 127 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 CENPBD1B2RD01 187 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 PTGES3LE9PB15 166 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 TRAPPC2LH3BP13 241 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 AHCYL1O43865 530 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 UBL3O95164 117 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 NGFP01138 241 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 IGHG1P01857 330 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 GYPBP06028 91 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 PATE4P0C8F1 98 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 OR8G3PP0DMU2 310 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 IGHV4-38-2P0DP08 117 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 CLUP10909 449 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 DBTP11182 482 aaKnown RBP9.04□□□□□ -0.96
TOP3A-210ENST00000580713 ZNF12P17014 697 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 SPI1P17947 270 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 SLC2A5P22732 501 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 HTR1FP30939 366 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 CLRN1P58418 232 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 KRTAP10-3P60369 221 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 SLC35A2P78381 396 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 TMED1Q13445 227 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 HLXQ14774 488 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-210ENST00000580713 LCN1P1Q5VSP4 162 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 FIP1L1Q6UN15 594 aaKnown RBP9.04□□□□□ -0.96
TOP3A-210ENST00000580713 Q6ZPA2 131 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 AHSA2Q719I0 299 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 NOXO1Q8NFA2 376 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 TSPAN14Q8NG11 270 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 OR2T4Q8NH00 348 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 GGHQ92820 318 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 RNFT2Q96EX2 444 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 SLC25A44Q96H78 314 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-210ENST00000580713 DCLRE1CQ96SD1 692 aaKnown RBP9.04□□□□□ -0.96
TOP3A-210ENST00000580713 COPS4Q9BT78 406 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 SYT4Q9H2B2 425 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 DUSP21Q9H596 190 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 CDH20Q9HBT6 801 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 TCF7L1Q9HCS4 588 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 SRA1Q9HD15 236 aaKnown RBP9.04□□□□□ -0.96
TOP3A-210ENST00000580713 CCNB1IP1Q9NPC3 277 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 CNOT2Q9NZN8 540 aaKnown RBP9.04□□□□□ -0.96
TOP3A-210ENST00000580713 WARS2Q9UGM6 360 aaKnown RBP9.04□□□□□ -0.96
TOP3A-210ENST00000580713 PSORS1C1Q9UIG5 152 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 FBXL3Q9UKT7 428 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 RNF114Q9Y508 228 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 INSIG2Q9Y5U4 225 aa9.04□□□□□ -0.96
TOP3A-210ENST00000580713 KMT2CQ8NEZ4 4911 aaKnown RBP9.04□□□□□ -0.96
TOP3A-210ENST00000580713 IGLV3-9A0A075B6K5 115 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 A0A087WXM4 84 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 IRGMA1A4Y4 181 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 CCDC182A6NF36 153 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 SPRY3O43610 288 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 RGS10O43665 173 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 GLCEO94923 617 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 SERPINA5P05154 406 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 PGA4P0DJD7 388 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 PGA3P0DJD8 388 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 PIPP12273 146 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-210ENST00000580713 NR2C1P13056 603 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 CCL2P13500 99 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 ZNF250P15622 560 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 SELEP16581 610 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 CRABP1P29762 137 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 PYCR1P32322 319 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 SLC15A1P46059 708 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 CSNK1A1P48729 337 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 ZNF81P51508 661 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 ERVS71-1P61550 626 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 TNP2Q05952 138 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 KLHL22Q53GT1 634 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 SLC35D3Q5M8T2 416 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 DNM1P34Q6PK57 102 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 C20orf196Q8IYI0 205 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 TMEM123Q8N131 208 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 STX19Q8N4C7 294 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 CPEB3Q8NE35 698 aaKnown RBP9.03□□□□□ -0.96
TOP3A-210ENST00000580713 SLC30A7Q8NEW0 376 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 PROKR2Q8NFJ6 384 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 OR51L1Q8NGJ5 315 aa9.03□□□□□ -0.96
TOP3A-210ENST00000580713 OR6K6Q8NGW6 343 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms