RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 CORO6Q6QEF8 472 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 ZNF474Q6S9Z5 364 aaPredicted RBP8.86□□□□□ -0.99
SS18-210ENST00000578700 UNQ9370/PRO34162Q6UXP9 181 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 FOXL2NBQ6ZUU3 175 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 BTLAQ7Z6A9 289 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 CATSPERDQ86XM0 798 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 WDFY1Q8IWB7 410 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 OR13C5Q8NGS8 318 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 FNDC9Q8TBE3 224 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 HSD17B8Q92506 261 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 SPTSSAQ969W0 71 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 MAP6Q96JE9 813 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 DCLRE1CQ96SD1 692 aaKnown RBP8.86□□□□□ -0.99
SS18-210ENST00000578700 BARHL1Q9BZE3 327 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 LINC00470Q9BZP3 86 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 CRLF2Q9HC73 371 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 NOX4Q9NPH5 578 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 GLRX2Q9NS18 164 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 CLCF1Q9UBD9 225 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 COMMD3Q9UBI1 195 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 UPB1Q9UBR1 384 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 OR52A1Q9UKL2 312 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 HHLA2Q9UM44 414 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 UGT2A1Q9Y4X1 527 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 LHFPL6Q9Y693 200 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 USF3Q68DE3 2245 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 TRBV5-5A0A0J9YX44 114 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 A0A1W2PPK0 400 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 SMIM30A4D0T7 59 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 ACOD1A6NK06 481 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 ANXA2P2A6NMY6 339 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 NOTOA8MTQ0 251 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 C16orf97H3BN30 126 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 CTDSP2O14595 271 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 PLAUP00749 431 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 IFNA2P01563 188 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 ANXA2P07355 339 aaKnown RBP8.85□□□□□ -0.99
SS18-210ENST00000578700 CST2P09228 141 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 ZNF12P17014 697 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 ACHEP22303 614 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 RANBP1P43487 201 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 SOX2P48431 317 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 PSMA6P60900 246 aaKnown RBP8.85□□□□□ -0.99
SS18-210ENST00000578700 ODF4Q2M2E3 257 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 NRN1LQ496H8 165 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 SFXN4Q6P4A7 337 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 ADGRE4PQ86SQ3 457 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 UBE2J2Q8N2K1 259 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 PRSS35Q8N3Z0 413 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 LRRC18Q8N456 261 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 ZNF433Q8N7K0 673 aaPredicted RBP8.85□□□□□ -0.99
SS18-210ENST00000578700 ZNF283Q8N7M2 679 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 ZNF610Q8N9Z0 462 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 OR13C3Q8NGS6 347 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 TMEM106AQ96A25 262 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 DIRAS2Q96HU8 199 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 WDFY2Q96P53 400 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 DERL3Q96Q80 235 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 ZNF416Q9BWM5 594 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 BCO1Q9HAY6 547 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 YAE1D1Q9NRH1 226 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 TMEM38BQ9NVV0 291 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 DAPK2Q9UIK4 370 aa8.85□□□□□ -0.99
SS18-210ENST00000578700 A0A1B0GVI7 797 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 ANKRD61A6NGH8 418 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 FAM25AB3EWG3 89 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 FAM25CB3EWG5 89 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 FAM25GB3EWG6 89 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 J3QRK9 145 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 RER1O15258 196 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 NCR1O76036 304 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 ISG15P05161 165 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 PSKH1P11801 424 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 TNFSF8P32971 234 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 ETV6P41212 452 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 KIR3DL2P43630 455 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 DEFA1P59665 94 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 DEFA3P59666 94 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 RPS11P62280 158 aaKnown RBP eCLIP8.84□□□□□ -0.99
SS18-210ENST00000578700 CLEC12BQ2HXU8 276 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 ZNF181Q2M3W8 571 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 RGS21Q2M5E4 152 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 CEACAM16Q2WEN9 425 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 ELFN2Q5R3F8 820 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 PHYHD1Q5SRE7 291 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 FAM27D1Q5T7N8 215 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 OR2A2Q6IF42 318 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 FAM131AQ6UXB0 335 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 CFAP77Q6ZQR2 320 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 C22orf34Q6ZV56 151 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 SLC16A14Q7RTX9 510 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 SYT9Q86SS6 491 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 CCDC190Q86UF4 302 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 COMMD2Q86X83 199 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 TUSC5Q8IXB3 177 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 MFSD4AQ8N468 514 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 SLC22A24Q8N4F4 322 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 ZNF671Q8TAW3 534 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 TMEM158Q8WZ71 300 aa8.84□□□□□ -0.99
SS18-210ENST00000578700 ALKBH3Q96Q83 286 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms