RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 C19orf18Q8NEA5 215 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 OR2T4Q8NH00 348 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 OR8S1Q8NH09 359 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 ST8SIA4Q92187 359 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 SIRPDQ9H106 197 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 CNTD2Q9H8S5 307 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 KAAG1Q9UBP8 84 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 CTSZQ9UBR2 303 aa11.77□□□□□ -0.53
SMARCD2-205ENST00000577686 TRBV4-1A0A0J9YWV2 114 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 DCTN6O00399 190 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 DVL1O14640 695 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 OR10H3O60404 316 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 TIPRLO75663 272 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 PAHP00439 452 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 GYPAP02724 150 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 GRPP07492 148 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 MUC1P15941 1255 aaPredicted RBP11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 HIST1H1CP16403 213 aaKnown RBP11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 NAA10P41227 235 aaPredicted RBP11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 IER3P46695 156 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 NUDT2P50583 147 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 ARF6P62330 175 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 SPIBQ01892 262 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 SRSF4Q08170 494 aaKnown RBP11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 MICBQ29980 383 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 CDONQ4KMG0 1287 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 GALNT4Q8N4A0 578 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 PROKR2Q8NFJ6 384 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 OR52J3Q8NH60 311 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 LINC01006Q8NI28 216 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 DHRS1Q96LJ7 313 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 COPS4Q9BT78 406 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 ARMCX1Q9P291 453 aa11.76□□□□□ -0.53
SMARCD2-205ENST00000577686 A0A0U1RQK1 487 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 IGHV4-59P01825 116 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 APOC1P02654 83 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 NCK1P16333 377 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 CFL1P23528 166 aaKnown RBP11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 TGFBR2P37173 567 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 SLC15A1P46059 708 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 PRSS12P56730 875 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 FXYD6P3P58550 94 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 SF3A3Q12874 501 aaKnown RBP eCLIP11.75□□□□□ -0.536e-6■□□□□ 10.9
SMARCD2-205ENST00000577686 RSPO1Q2MKA7 263 aaPredicted RBP11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 TEX36Q5VZQ5 186 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 GLYATQ6IB77 296 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 ASPHD2Q6ICH7 369 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 FTMTQ8N4E7 242 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 DTX3Q8N9I9 347 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 SDR9C7Q8NEX9 313 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 OR5R1Q8NH85 324 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 CMTM5Q96DZ9 223 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 RNPEPL1Q9HAU8 725 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 SPAG4Q9NPE6 437 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 ONECUT1Q9UBC0 465 aa11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 RPUSD1Q9UJJ7 312 aaKnown RBP11.75□□□□□ -0.53
SMARCD2-205ENST00000577686 NDUFB3O43676 98 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 GNALP38405 381 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 PROK1P58294 105 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 ZNF92Q03936 586 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 SEC23BQ15437 767 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 C11orf88Q6PI97 169 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 METAP1DQ6UB28 335 aaPredicted RBP11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 RHOUQ7L0Q8 258 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 VMO1Q7Z5L0 202 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 CPLX4Q7Z7G2 160 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 FAM86B1Q8N7N1 296 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 ZSCAN4Q8NAM6 433 aaPredicted RBP11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 OR56B2PQ8NGI1 322 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 GNPDA2Q8TDQ7 276 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 C12orf43Q96C57 262 aaKnown RBP11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 C16orf95Q9H693 158 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 SMURF1Q9HCE7 757 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 PNRC2Q9NPJ4 139 aaKnown RBP11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 DCAF13Q9NV06 445 aaKnown RBP11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 MAGEL2Q9UJ55 1249 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 VPREB3Q9UKI3 123 aa11.74□□□□□ -0.53
SMARCD2-205ENST00000577686 C5orf63A6NC05 138 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 ANKRD61A6NGH8 418 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 NKX6-3A6NJ46 265 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 ZNF878C9JN71 531 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 CSF1P09603 554 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 FMO3P31513 532 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 OTX1P32242 354 aaPredicted RBP11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 BLVRAP53004 296 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 PSME3P61289 254 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 GRB2P62993 217 aaKnown RBP11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 BLMHQ13867 455 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 TIGD6Q17RP2 521 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 SNAI3Q3KNW1 292 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 LRRC10Q5BKY1 277 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 GLYATL3Q5SZD4 288 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 DPY19L4Q7Z388 723 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 NAA40Q86UY6 237 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 FAM90A1Q86YD7 464 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 ZDHHC21Q8IVQ6 265 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 LNX2Q8N448 690 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 LINC00471Q8N535 108 aa11.73□□□□□ -0.53
SMARCD2-205ENST00000577686 GCSAMQ8N6F7 178 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms