RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 SEH1LQ96EE3 360 aa1.02□□□□□ -2.25
TOP2A-202ENST00000577541 SGTBQ96EQ0 304 aa1.02□□□□□ -2.25
TOP2A-202ENST00000577541 GALNT14Q96FL9 552 aa1.02□□□□□ -2.25
TOP2A-202ENST00000577541 DNAJC1Q96KC8 554 aaKnown RBP1.02□□□□□ -2.25
TOP2A-202ENST00000577541 FAM19A4Q96LR4 140 aa1.02□□□□□ -2.25
TOP2A-202ENST00000577541 AGMATQ9BSE5 352 aa1.02□□□□□ -2.25
TOP2A-202ENST00000577541 TIMM29Q9BSF4 260 aa1.02□□□□□ -2.25
TOP2A-202ENST00000577541 PIGUQ9H490 435 aa1.02□□□□□ -2.25
TOP2A-202ENST00000577541 MRM3Q9HC36 420 aaKnown RBP1.02□□□□□ -2.25
TOP2A-202ENST00000577541 CA10Q9NS85 328 aa1.02□□□□□ -2.25
TOP2A-202ENST00000577541 ZNRD1Q9P1U0 126 aa1.02□□□□□ -2.25
TOP2A-202ENST00000577541 ZNF229Q9UJW7 825 aa1.02□□□□□ -2.25
TOP2A-202ENST00000577541 FARSAQ9Y285 508 aaKnown RBP1.02□□□□□ -2.25
TOP2A-202ENST00000577541 CAB39Q9Y376 341 aaPredicted RBP1.02□□□□□ -2.25
TOP2A-202ENST00000577541 CABIN1Q9Y6J0 2220 aa1.02□□□□□ -2.25
TOP2A-202ENST00000577541 AHDC1Q5TGY3 1603 aaPredicted RBP1.01□□□□□ -2.25
TOP2A-202ENST00000577541 NID2Q14112 1375 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 PLEKHG2Q9H7P9 1386 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 ADGRA3Q8IWK6 1321 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 IGHV3-72A0A0B4J1Y9 119 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 ANKRD65E5RJM6 399 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 H0YIV9 168 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 RBFOX2O43251 390 aaKnown RBP eCLIP1.01□□□□□ -2.25
TOP2A-202ENST00000577541 YIF1AO95070 293 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 VAMP5O95183 116 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 IGKV1D-16P01601 117 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 APCSP02743 223 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 TACSTD2P09758 323 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 ERGP11308 486 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 RAB3AP20336 220 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 F2RP25116 425 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 CD82P27701 267 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 MAGEA1P43355 309 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 DAOAP59103 153 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 TAS2R31P59538 309 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 TAS2R46P59540 309 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 UBE2NP61088 152 aaKnown RBP1.01□□□□□ -2.25
TOP2A-202ENST00000577541 PAFAH1B2P68402 229 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 CRADDP78560 199 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 LCN2P80188 198 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 CDK5Q00535 292 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 ZNF33AQ06730 810 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 PRPSAP1Q14558 356 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 KLHL40Q2TBA0 621 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 SMUG1Q53HV7 270 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 MPV17L2Q567V2 206 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 AVPI1Q5T686 147 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 TPTE2P1Q5T6R2 138 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 PLCXD3Q63HM9 321 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 STUMQ69YW2 141 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 GUSBP11Q6P575 273 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 EPGNQ6UW88 154 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 BRD3OSQ6XYD6 125 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 SSX9Q7RTT3 188 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 MRPL21Q7Z2W9 205 aaKnown RBP1.01□□□□□ -2.25
TOP2A-202ENST00000577541 NKAIN4Q8IVV8 208 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 VKORC1L1Q8N0U8 176 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 NECAP1Q8NC96 275 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 OR4A15Q8NGL6 344 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 TCP10LQ8TDR4 215 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 TFGQ92734 400 aaPredicted RBP1.01□□□□□ -2.25
TOP2A-202ENST00000577541 ISOC2Q96AB3 205 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 ISG20Q96AZ6 181 aaKnown RBP1.01□□□□□ -2.25
TOP2A-202ENST00000577541 OPALINQ96PE5 141 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 GSDMAQ96QA5 445 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 CDX2Q99626 313 aaPredicted RBP1.01□□□□□ -2.25
TOP2A-202ENST00000577541 RNF5Q99942 180 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 ANP32EQ9BTT0 268 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 DHX35Q9H5Z1 703 aaKnown RBP1.01□□□□□ -2.25
TOP2A-202ENST00000577541 TMEM27Q9HBJ8 222 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 SLC39A1Q9NY26 324 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 DDX19BQ9UMR2 479 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 ZNF257Q9Y2Q1 563 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 KPTNQ9Y664 436 aa1.01□□□□□ -2.25
TOP2A-202ENST00000577541 TNIKQ9UKE5 1360 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 TENM1Q9UKZ4 2725 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 IGKV3D-11A0A0A0MRZ8 115 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 A0A0A6YYD5 115 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 IGHV1OR15-9A0A0B4J2B8 117 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 A0A0B4J2E0 115 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 CCL15-CCL14A0A0B4J2E2 113 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 IGHV1-69DA0A0B4J2H0 117 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 TMEM223A0PJW6 202 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 TMEM120BA0PK00 339 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 SLC22A20A6NK97 555 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 K7EN84 100 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 DYNC1I1O14576 645 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 CASC3O15234 703 aaKnown RBP1□□□□□ -2.25
TOP2A-202ENST00000577541 GMDSO60547 372 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 CTNSO60931 367 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 GLSO94925 669 aaPredicted RBP1□□□□□ -2.25
TOP2A-202ENST00000577541 TGM6O95932 706 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 IGKV1-39P01597 117 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 TRBV12-3P01733 135 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 HLA-DQB1P01920 261 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 IGKV1D-39P04432 117 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 CRYGCP07315 174 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 HMOX2P30519 316 aa1□□□□□ -2.25
TOP2A-202ENST00000577541 CCT6AP40227 531 aaKnown RBP1□□□□□ -2.25
TOP2A-202ENST00000577541 PEX19P40855 299 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms