RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 IGKV1D-43A0A0B4J1Z2 117 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 NPIPB13A6NJU9 1138 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 IQCF6A8MYZ5 107 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 B2RBV5 119 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 NPIPB4C9JG80 1138 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 SULT1B1O43704 296 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 ANGPTL7O43827 346 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 GYPAP02724 150 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 ASAH2BP0C7U1 165 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 ZNF3P17036 446 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 S100A1P23297 94 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 PMELP40967 661 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 CD200P41217 278 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 UBE2E1P51965 193 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 UGT2B15P54855 530 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 MRPS15P82914 257 aaKnown RBP4.8□□□□□ -1.64
SMG6-219ENST00000575663 RELQ04864 619 aaPredicted RBP4.8□□□□□ -1.64
SMG6-219ENST00000575663 RPL18Q07020 188 aaKnown RBP4.8□□□□□ -1.64
SMG6-219ENST00000575663 ECH1Q13011 328 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 KLRD1Q13241 179 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 RGNQ15493 299 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 CLEC12AQ5QGZ9 265 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 C6orf10Q5SRN2 563 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 PRAMEF6Q5VXH4 476 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 MZT2AQ6P582 158 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 UNQ9370/PRO34162Q6UXP9 181 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 SPARTQ8N0X7 666 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 PGAM4Q8N0Y7 254 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 BOLLQ8N9W6 283 aaKnown RBP4.8□□□□□ -1.64
SMG6-219ENST00000575663 NFKBIDQ8NI38 313 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 C8orf46Q8TAG6 207 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 HDAC2Q92769 488 aaKnown RBP4.8□□□□□ -1.64
SMG6-219ENST00000575663 MAL2Q969L2 176 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 MCUR1Q96AQ8 359 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 VPS33AQ96AX1 596 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 ITCHQ96J02 903 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 RBP7Q96R05 134 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 DDOQ99489 341 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 MCRIP2Q9BUT9 160 aaKnown RBP4.8□□□□□ -1.64
SMG6-219ENST00000575663 ALG12Q9BV10 488 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 HCAR1Q9BXC0 346 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 MUC13Q9H3R2 512 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 NCOR1P1Q9H4R4 102 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 ZNF702PQ9H963 129 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 SERTAD4Q9NUC0 356 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 ARL8BQ9NVJ2 186 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 AURKCQ9UQB9 309 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 STARD9Q9P2P6 4700 aa4.8□□□□□ -1.64
SMG6-219ENST00000575663 CPSF4LA6NMK7 179 aaKnown RBP4.79□□□□□ -1.64
SMG6-219ENST00000575663 F2RL2O00254 374 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 ANGPT2O15123 496 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 GSC2O15499 205 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 SERPINB7O75635 380 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 THY1P04216 161 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 HLA-DPB1P04440 258 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 CHRM2P08172 466 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 NUDT7P0C024 238 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 ATP6V1B1P15313 513 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 VDAC2P45880 294 aaPredicted RBP4.79□□□□□ -1.64
SMG6-219ENST00000575663 ETV1P50549 477 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 BMXP51813 675 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 UFM1P61960 85 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 MAB21L1Q13394 359 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 TOP3AQ13472 1001 aaPredicted RBP4.79□□□□□ -1.64
SMG6-219ENST00000575663 AQP6Q13520 282 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 BLMHQ13867 455 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 ENDOGQ14249 297 aaKnown RBP4.79□□□□□ -1.64
SMG6-219ENST00000575663 HABP2Q14520 560 aaPredicted RBP4.79□□□□□ -1.64
SMG6-219ENST00000575663 OR8G1Q15617 311 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 NPTX1Q15818 432 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 GTDC1Q4AE62 458 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 KHDC1LQ5JSQ8 128 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 GCNT6Q5T4J0 391 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 REEP3Q6NUK4 255 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 PGM2L1Q6PCE3 622 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 SLC25A47Q6Q0C1 308 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 FOXL2NBQ6ZUU3 175 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 SLC36A1Q7Z2H8 476 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 COMTD1Q86VU5 262 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 ARMC8Q8IUR7 673 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 Q8N2B8 174 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 APOBEC3DQ96AK3 386 aaPredicted RBP4.79□□□□□ -1.64
SMG6-219ENST00000575663 NMD3Q96D46 503 aaKnown RBP4.79□□□□□ -1.64
SMG6-219ENST00000575663 MAP6Q96JE9 813 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 NR1H4Q96RI1 486 aaPredicted RBP4.79□□□□□ -1.64
SMG6-219ENST00000575663 MCHR1Q99705 422 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 ADAT1Q9BUB4 502 aaKnown RBP4.79□□□□□ -1.64
SMG6-219ENST00000575663 PRSS22Q9GZN4 317 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 SLC22A4Q9H015 551 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 METTL8Q9H825 291 aaKnown RBP4.79□□□□□ -1.64
SMG6-219ENST00000575663 POLE4Q9NR33 117 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 KAAG1Q9UBP8 84 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 PITPNC1Q9UKF7 332 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 SLC7A7Q9UM01 511 aa4.79□□□□□ -1.64
SMG6-219ENST00000575663 SF3B6Q9Y3B4 125 aaKnown RBP4.79□□□□□ -1.64
SMG6-219ENST00000575663 TSSC4Q9Y5U2 329 aaPredicted RBP4.79□□□□□ -1.64
SMG6-219ENST00000575663 HERC2O95714 4834 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 NOTCH3Q9UM47 2321 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 TRBV23-1A0A0A0MS06 115 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 A0A1B0GWJ7 208 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms