RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ISPDA4D126 451 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 TVP23AA6NH52 213 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 NUDT19A8MXV4 375 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 ZNF593O00488 134 aaPredicted RBP6.27□□□□□ -1.41
NUP88-205ENST00000572809 PLPP2O43688 288 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 SOX14O95416 240 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 IGHV2-5P01817 119 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 LCATP04180 440 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 SBK2P0C263 348 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 ACSM4P0C7M7 580 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 SELEP16581 610 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 HOXB6P17509 224 aaKnown RBP6.27□□□□□ -1.41
NUP88-205ENST00000572809 FMO3P31513 532 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 ERFP50548 548 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 MALLQ13021 153 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 CRMP1Q14194 572 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 GFOD2Q3B7J2 385 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 KRTAP27-1Q3LI81 207 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 LIPNQ5VXI9 398 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 CD300LDQ6UXZ3 194 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 ADGRG5Q8IZF4 528 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 ZNF283Q8N7M2 679 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 OR10G2Q8NGC3 310 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 OR9Q1Q8NGQ5 310 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 OR4Q3Q8NH05 313 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 ST7LQ8TDW4 575 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 ITLN1Q8WWA0 313 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 SPTSSAQ969W0 71 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 SLCO4A1Q96BD0 722 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 OR2V2Q96R30 315 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 FEVQ99581 238 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 GAL3ST1Q99999 423 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 NIPSNAP1Q9BPW8 284 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 RBM4Q9BWF3 364 aaKnown RBP6.27□□□□□ -1.41
NUP88-205ENST00000572809 HCAR1Q9BXC0 346 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 WDR76Q9H967 626 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 PNRC2Q9NPJ4 139 aaKnown RBP6.27□□□□□ -1.41
NUP88-205ENST00000572809 TMEM100Q9NV29 134 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 ARMC1Q9NVT9 282 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 UBAP1Q9NZ09 502 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 PPP1R3CQ9UQK1 317 aa6.27□□□□□ -1.41
NUP88-205ENST00000572809 ANK3Q12955 4377 aaKnown RBP6.27□□□□□ -1.41
NUP88-205ENST00000572809 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.26□□□□□ -1.41
NUP88-205ENST00000572809 DHRS12A0PJE2 317 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 RIIAD1A6NNX1 92 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 IQCF6A8MYZ5 107 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 H0YL77 283 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 H3BN98 237 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 PNPP00491 289 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 IFNGP01579 166 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 IGHV2-70P01814 119 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 GYPBP06028 91 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 CLUP10909 449 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 SPI1P17947 270 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 RBMXP38159 391 aaKnown RBP6.26□□□□□ -1.41
NUP88-205ENST00000572809 RPS27P42677 84 aaKnown RBP6.26□□□□□ -1.41
NUP88-205ENST00000572809 SRP9P49458 86 aaKnown RBP6.26□□□□□ -1.41
NUP88-205ENST00000572809 ENTPD1P49961 510 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 BLVRAP53004 296 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 SLC25A1P53007 311 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 FLOT2Q14254 428 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 GK2Q14410 553 aaPredicted RBP6.26□□□□□ -1.41
NUP88-205ENST00000572809 TAF13Q15543 124 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 DNAL1Q4LDG9 190 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 TEX30Q5JUR7 227 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 PGAP1Q75T13 922 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 DCXRQ7Z4W1 244 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 TMEM179BQ7Z7N9 219 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 SPATA24Q86W54 205 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 LRRC28Q86X40 367 aaPredicted RBP6.26□□□□□ -1.41
NUP88-205ENST00000572809 PHC2Q8IXK0 858 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 KLHL36Q8N4N3 616 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 BHLHE23Q8NDY6 225 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 OR10S1Q8NGN2 331 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 TEX47Q8TBZ9 253 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 SLC7A6OSQ96CW6 309 aaPredicted RBP6.26□□□□□ -1.41
NUP88-205ENST00000572809 SLC30A2Q9BRI3 323 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 NMNAT2Q9BZQ4 307 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 YY1AP1Q9H869 796 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 GCM1Q9NP62 436 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 G6PC2Q9NQR9 355 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 CMC2Q9NRP2 79 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 CENPMQ9NSP4 180 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 DCAF16Q9NXF7 216 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 PDP1Q9P0J1 537 aaPredicted RBP6.26□□□□□ -1.41
NUP88-205ENST00000572809 POMPQ9Y244 141 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 ATRQ13535 2644 aa6.26□□□□□ -1.41
NUP88-205ENST00000572809 FBN1P35555 2871 aaKnown RBP6.25□□□□□ -1.41
NUP88-205ENST00000572809 COL6A5A8TX70 2615 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 ARRDC5A6NEK1 342 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 FAM183AA6NL82 134 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 F5H5P2 479 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 TMEM178BH3BS89 294 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 IFNL4K9M1U5 179 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 M0R135 149 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 MLNRO43193 412 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 TCF21O43680 179 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 E2F6O75461 281 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 FOXH1O75593 365 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 HLA-DPB1P04440 258 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms