RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 F8W036 122 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 RP2O75695 350 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 EIF3GO75821 320 aaKnown RBP eCLIP4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 SOX14O95416 240 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 CLDN14O95500 239 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 CLDN1O95832 211 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 NUDT14O95848 222 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 BMP15O95972 392 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 PEX11BO96011 259 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 IFNA1P01562 189 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 HCKP08631 526 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 FAM228BP0C875 321 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 SLC2A2P11168 524 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 IFI30P13284 250 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 GPR183P32249 361 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 RPS9P46781 194 aaKnown RBP4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 HOXA1P49639 335 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 PDLIM4P50479 330 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 SUB1P53999 127 aaKnown RBP eCLIP4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF260Q3ZCT1 412 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 MS4A13Q5J8X5 152 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 RPL13AP3Q6NVV1 102 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 TNFAIP8L2Q6P589 184 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF790Q6PG37 636 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 TMEM219Q86XT9 240 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 ODF3L1Q8IXM7 274 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 PIANPQ8IYJ0 282 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 PNKDQ8N490 385 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 ZADH2Q8N4Q0 377 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 RBMXL3Q8N7X1 1067 aaKnown RBP4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF557Q8N988 423 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF383Q8NA42 475 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 GATD1Q8NB37 220 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 OR4M2Q8NGB6 313 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 OR52B6Q8NGF0 335 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 OR13D1Q8NGV5 346 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 OR51Q1Q8NH59 317 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 PIFOQ8TCI5 191 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 UCN3Q969E3 161 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 ZMYND19Q96E35 227 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 CPNE2Q96FN4 548 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 CMTM7Q96FZ5 175 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 WBP1Q96G27 269 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 ALKBH3Q96Q83 286 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 GABRG3Q99928 467 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 MS4A6AQ9H2W1 248 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 NMNAT1Q9HAN9 279 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 TMEM138Q9NPI0 162 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 RRAGDQ9NQL2 400 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 ARMCX1Q9P291 453 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 C11orf21Q9P2W6 132 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 FAM32AQ9Y421 112 aaKnown RBP4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 TESMINQ9Y4I5 508 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 NRCAMQ92823 1304 aa4.18□□□□□ -1.74
TOPBP1-210ENST00000572787 IGHV2OR16-5A0A0B4J2B6 119 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF724A8MTY0 619 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 B4DXG7 233 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 ANKRD65E5RJM6 399 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 ICOSLGO75144 302 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 S1PR2O95136 353 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 VENTXO95231 258 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 PTTG1O95997 202 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 THY1P04216 161 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 SEMG1P04279 462 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 MRPL3P09001 348 aaKnown RBP4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 GIPP09681 153 aaPredicted RBP4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 WT1P19544 449 aaPredicted RBP4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 HIST1H1TP22492 207 aaPredicted RBP4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 S100GP29377 79 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 BTDP43251 543 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 FABP6P51161 128 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 GPM6AP51674 278 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 EFNA3P52797 238 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 TCTAP57738 103 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 RAB2AP61019 212 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 SNRPD1P62314 119 aaKnown RBP4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 RPL24P83731 157 aaKnown RBP4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 SLC25A11Q02978 314 aaKnown RBP4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 CD300CQ08708 224 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 MLANAQ16655 118 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 C4orf26Q17RF5 130 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 LRRC26Q2I0M4 334 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 LRRC75BQ2VPJ9 315 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 EPGNQ6UW88 154 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 Q6ZTK2 550 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 C3orf62Q6ZUJ4 267 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 SH2D5Q6ZV89 423 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 ATG4DQ86TL0 474 aaPredicted RBP4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 ISCA2Q86U28 154 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 CBLN2Q8IUK8 224 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 PRR22Q8IZ63 422 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 SLC34A3Q8N130 599 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 FBXL14Q8N1E6 418 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 ARIH2OSQ8N7S6 290 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 SLC26A10Q8NG04 563 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 OR2Z1Q8NG97 314 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 OR4C13Q8NGP0 309 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 OR5AR1Q8NGP9 310 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 OR2A1Q8NGT9 310 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms