RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 F2RL3Q96RI0 385 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 SORT1Q99523 831 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 GPR21Q99679 349 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 TCEAL7Q9BRU2 100 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 LRRC40Q9H9A6 602 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 CBLN4Q9NTU7 201 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 ACOXLQ9NUZ1 547 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 GLTPQ9NZD2 209 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 EXTL2Q9UBQ6 330 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 PLLPQ9Y342 182 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 PRELID3BQ9Y3B1 194 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF337Q9Y3M9 751 aa4.48□□□□□ -1.69
SF3B3-214ENST00000572365 LRIT2A6NDA9 550 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 C12orf71A8MTZ7 269 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 E7ESA3 106 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 ATP6V1G2-DDX39BF2Z307 99 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 J3QRK9 145 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 hCG_2039718K7EN88 272 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 SSX5O60225 188 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 GLRA3O75311 464 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 EEDO75530 441 aaKnown RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 UGT2B17O75795 530 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 LYZL6O75951 148 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 DFFBO76075 338 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 IFNA7P01567 189 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 IGHV4-59P01825 116 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 APOHP02749 345 aaPredicted RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 CLPSP04118 112 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 IGKV3-11P04433 115 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 SERPINE1P05121 402 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 S100A9P06702 114 aaKnown RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 GPIP06744 558 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 BPGMP07738 259 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 DBTP11182 482 aaKnown RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 MDKP21741 143 aaPredicted RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 HLA-DMAP28067 261 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 RCVRNP35243 200 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 SOX6P35712 828 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 OPRL1P41146 370 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 HTR2BP41595 481 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF83P51522 516 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 EFNA4P52798 201 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 UGT2B15P54855 530 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 CTBP2P56545 445 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 HERV-K104P61576 105 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 SKP1P63208 163 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 MRPS22P82650 360 aaKnown RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 PMS2P3Q13401 168 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 P2RY6Q15077 328 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 SGCBQ16585 318 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF674Q2M3X9 581 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 RFX4Q33E94 735 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 HSD17B12Q53GQ0 312 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 FBXO48Q5FWF7 155 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 SPANXN2Q5MJ10 180 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 SAMD4BQ5PRF9 694 aaKnown RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 HES5Q5TA89 166 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 METTL11BQ5VVY1 283 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 SLC35E4Q6ICL7 350 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 OR2A2Q6IF42 318 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 HACD2Q6Y1H2 254 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 TIFABQ6ZNK6 161 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 NUFIP2Q7Z417 695 aaKnown RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 TCTE3Q8IZS6 198 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 MUC15Q8N387 334 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 RNF175Q8N4F7 328 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF781Q8N8C0 355 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 OR6F1Q8NGZ6 308 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 OR8K3Q8NH51 312 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 NUBPLQ8TB37 319 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 FCGR1BQ92637 280 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 RPL3LQ92901 407 aaKnown RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 MS4A6EQ96DS6 147 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 AURKBQ96GD4 344 aaPredicted RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 CENPNQ96H22 339 aaPredicted RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 RBM18Q96H35 190 aaKnown RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 HYLS1Q96M11 299 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 RBM14Q96PK6 669 aaKnown RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 RBM4Q9BWF3 364 aaKnown RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF350Q9GZX5 532 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 RNF122Q9H9V4 155 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 FANCFQ9NPI8 374 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 TIGARQ9NQ88 270 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 MED29Q9NX70 200 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 PAQR5Q9NXK6 330 aaPredicted RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 SLCO1C1Q9NYB5 712 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 KLRF1Q9NZS2 232 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 EIF3KQ9UBQ5 218 aaKnown RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 WARS2Q9UGM6 360 aaKnown RBP4.47□□□□□ -1.69
SF3B3-214ENST00000572365 DKKL1Q9UK85 242 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 RNF11Q9Y3C5 154 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 CBY1Q9Y3M2 126 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 FKBP7Q9Y680 259 aa4.47□□□□□ -1.69
SF3B3-214ENST00000572365 TCRBV3S1A0A5B6 114 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 PQLC2LA1A4F0 135 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 F8VVB4 439 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 F8VWA3 439 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 G3V4G9 280 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 SLC33A1O00400 549 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 CIDEAO60543 219 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms