RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 SIGLEC9Q9Y336 463 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 ENPP4Q9Y6X5 453 aa9.94□□□□□ -0.82
CAPN3-220ENST00000569827 GGT3PA6NGU5 568 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 TVP23AA6NH52 213 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 M0R135 149 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 FSTL3O95633 263 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 NPPAP01160 153 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 TROVE2P10155 538 aaKnown RBP eCLIP9.93□□□□□ -0.82
CAPN3-220ENST00000569827 PAX6P26367 422 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 CRABP1P29762 137 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 PYCR1P32322 319 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 GSK3BP49841 420 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 CSNK2BP67870 215 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 MALLQ13021 153 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 MAPRE2Q15555 327 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 DNM1P34Q6PK57 102 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 SMARCD3Q6STE5 483 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 DPY19L2P2Q6ZN68 376 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 WDR86Q86TI4 376 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 CYP4Z1Q86W10 505 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 FAM216BQ8N7L0 139 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 CELF2-AS1Q8N7Q2 184 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 ZSCAN4Q8NAM6 433 aaPredicted RBP9.93□□□□□ -0.82
CAPN3-220ENST00000569827 OR56B2PQ8NGI1 322 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 OR2AJ1Q8NGZ0 328 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 ZNRF4Q8WWF5 429 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 ZNF799Q96GE5 643 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 CCL13Q99616 98 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 OR52D1Q9H346 318 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 NDUFAF4Q9P032 175 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 RPUSD1Q9UJJ7 312 aaKnown RBP9.93□□□□□ -0.82
CAPN3-220ENST00000569827 CAPN7Q9Y6W3 813 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 DNAH9Q9NYC9 4486 aa9.93□□□□□ -0.82
CAPN3-220ENST00000569827 KMT2CQ8NEZ4 4911 aaKnown RBP9.92□□□□□ -0.82
CAPN3-220ENST00000569827 TRAV38-1A0A0B4J264 116 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 ZNF816-ZNF321PA0A0X1KG74 233 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 OR6C68A6NDL8 312 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 HMGB1P1B2RPK0 211 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-220ENST00000569827 TXNDC12O95881 172 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 RENP00797 406 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 CSF1P09603 554 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 PRKXP51817 358 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 TPTEP56180 551 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 PCK2Q16822 640 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 C2orf68Q2NKX9 166 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 RFX4Q33E94 735 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 SLC35F1Q5T1Q4 408 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 LYG1Q8N1E2 194 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 CYB561A3Q8NBI2 242 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 OR51L1Q8NGJ5 315 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 LRRC29Q8WV35 223 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 ERGIC1Q969X5 290 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 SIKE1Q9BRV8 207 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 IFT27Q9BW83 186 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 ZNRD1Q9P1U0 126 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 CYB5R1Q9UHQ9 305 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 FOXJ3Q9UPW0 622 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 FAM96BQ9Y3D0 163 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 DSCAML1Q8TD84 2053 aa9.92□□□□□ -0.82
CAPN3-220ENST00000569827 RNASEK-C17orf49H0YIS7 233 aa9.91□□□□□ -0.82
CAPN3-220ENST00000569827 LIPFP07098 398 aa9.91□□□□□ -0.82
CAPN3-220ENST00000569827 IKZF1Q13422 519 aa9.91□□□□□ -0.82
CAPN3-220ENST00000569827 KCNJ8Q15842 424 aa9.91□□□□□ -0.82
CAPN3-220ENST00000569827 BEAN1Q3B7T3 259 aa9.91□□□□□ -0.82
CAPN3-220ENST00000569827 WDR38Q5JTN6 314 aa9.91□□□□□ -0.82
CAPN3-220ENST00000569827 PGM2L1Q6PCE3 622 aa9.91□□□□□ -0.82
CAPN3-220ENST00000569827 GDPGP1Q6ZNW5 385 aa9.91□□□□□ -0.82
CAPN3-220ENST00000569827 OR5T2Q8NGG2 359 aa9.91□□□□□ -0.82
CAPN3-220ENST00000569827 C17orf50Q8WW18 174 aa9.91□□□□□ -0.82
CAPN3-220ENST00000569827 ITPKCQ96DU7 683 aa9.91□□□□□ -0.82
CAPN3-220ENST00000569827 PPA2Q9H2U2 334 aa9.91□□□□□ -0.82
CAPN3-220ENST00000569827 ANKRD19PQ9H560 264 aa9.91□□□□□ -0.82
CAPN3-220ENST00000569827 VPREB3Q9UKI3 123 aa9.91□□□□□ -0.82
CAPN3-220ENST00000569827 A0A1W2PRQ8 180 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 BHLHE40O14503 412 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 ACOT8O14734 319 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 PTBP3O95758 552 aaKnown RBP9.9□□□□□ -0.82
CAPN3-220ENST00000569827 SLC6A6P31641 620 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 RPL15P61313 204 aaKnown RBP9.9□□□□□ -0.82
CAPN3-220ENST00000569827 SPIBQ01892 262 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.9□□□□□ -0.82
CAPN3-220ENST00000569827 DGCR6Q14129 220 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 FAM189A2Q15884 450 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 LY6EQ16553 131 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 CDONQ4KMG0 1287 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 SLC35E4Q6ICL7 350 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 C1orf122Q6ZSJ8 110 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 ZBTB46Q86UZ6 589 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 C11orf53Q8IXP5 236 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 RNF148Q8N7C7 305 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 Q8N7P7 452 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 OR9Q1Q8NGQ5 310 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 H1FXQ92522 213 aaKnown RBP9.9□□□□□ -0.82
CAPN3-220ENST00000569827 KCTD14Q9BQ13 255 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-220ENST00000569827 FUZQ9BT04 418 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 DPAGT1Q9H3H5 408 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 C16orf95Q9H693 158 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 CNTD2Q9H8S5 307 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 SNTG1Q9NSN8 517 aa9.9□□□□□ -0.82
CAPN3-220ENST00000569827 FAM32AQ9Y421 112 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms