RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	NUDT2	P50583	147 aa		13.72	□□□□□ -0.21
PKM-223	ENST00000569050	LSM6	P62312	80 aa	Known RBP	13.72	□□□□□ -0.21
PKM-223	ENST00000569050	CYP51A1	Q16850	503 aa		13.72	□□□□□ -0.21
PKM-223	ENST00000569050	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.72	□□□□□ -0.21
PKM-223	ENST00000569050	MEST	Q5EB52	335 aa		13.72	□□□□□ -0.21
PKM-223	ENST00000569050	FAM216B	Q8N7L0	139 aa		13.72	□□□□□ -0.21
PKM-223	ENST00000569050	CCDC197	Q8NCU1	140 aa		13.72	□□□□□ -0.21
PKM-223	ENST00000569050	SLCO4A1	Q96BD0	722 aa		13.72	□□□□□ -0.21
PKM-223	ENST00000569050	DMRTB1	Q96MA1	342 aa		13.72	□□□□□ -0.21
PKM-223	ENST00000569050	NKX3-1	Q99801	234 aa	Predicted RBP	13.72	□□□□□ -0.21
PKM-223	ENST00000569050	ADAM18	Q9Y3Q7	739 aa		13.72	□□□□□ -0.21
PKM-223	ENST00000569050		U3KQK5	164 aa		13.72	□□□□□ -0.21
PKM-223	ENST00000569050		A0A1W2PRX2	142 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050		E9PQ18	207 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	NDUFAB1	O14561	156 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	DCTN3	O75935	186 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	LHB	P01229	141 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	IFI30	P13284	250 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	HOXD3	P31249	432 aa	Predicted RBP	13.71	□□□□□ -0.21
PKM-223	ENST00000569050	BMX	P51813	675 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	SLC35A2	P78381	396 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	EGFEM1P	Q0D2K5	195 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	RABL3	Q5HYI8	236 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	COQ5	Q5HYK3	327 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	WDR38	Q5JTN6	314 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	HCP5	Q6MZN7	132 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	PATL1	Q86TB9	770 aa	Known RBP	13.71	□□□□□ -0.21
PKM-223	ENST00000569050		Q8N2B8	174 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	PLPP7	Q8NBV4	271 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	OR51A7	Q8NH64	312 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	RP9	Q8TA86	221 aa	Known RBP	13.71	□□□□□ -0.21
PKM-223	ENST00000569050	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.71	□□□□□ -0.21
PKM-223	ENST00000569050	BPIFA2	Q96DR5	249 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	DCTN5	Q9BTE1	182 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	HDHD2	Q9H0R4	259 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	PRPF19	Q9UMS4	504 aa	Known RBP	13.71	□□□□□ -0.21
PKM-223	ENST00000569050	COA3	Q9Y2R0	106 aa	Predicted RBP	13.71	□□□□□ -0.21
PKM-223	ENST00000569050	PCDHGB5	Q9Y5G0	923 aa		13.71	□□□□□ -0.21
PKM-223	ENST00000569050	hCG_1807616	A0A1W2PRN6	198 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	PRSS37	A4D1T9	235 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	IMPA2	O14732	288 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	HIST1H3A	P68431	136 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	PCK2	Q16822	640 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	KRTAP27-1	Q3LI81	207 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	HIST2H3PS2	Q5TEC6	136 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	NCR3LG1	Q68D85	454 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	HIST2H3A	Q71DI3	136 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	C8orf46	Q8TAG6	207 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	BCAS4	Q8TDM0	211 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	SLC26A7	Q8TE54	656 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	ACOT11	Q8WXI4	607 aa	Predicted RBP	13.7	□□□□□ -0.22
PKM-223	ENST00000569050	RCC1L	Q96I51	464 aa	Known RBP	13.7	□□□□□ -0.22
PKM-223	ENST00000569050		Q96M85	177 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	WNT10A	Q9GZT5	417 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	MEGF9	Q9H1U4	602 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	POLR1D	Q9Y2S0	133 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	SH3GLB1	Q9Y371	365 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050	LHFPL6	Q9Y693	200 aa		13.7	□□□□□ -0.22
PKM-223	ENST00000569050		A6NLC8	198 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	GRP	P07492	148 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	ACSM4	P0C7M7	580 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	PF4V1	P10720	104 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	SELL	P14151	372 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	IKZF1	Q13422	519 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	AANAT	Q16613	207 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	NANOGP8	Q6NSW7	305 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	LIAT1	Q6ZQX7	453 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	PGAP1	Q75T13	922 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	GLB1L2	Q8IW92	636 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	DTX3	Q8N9I9	347 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	OR13C2	Q8NGS9	318 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	OR10A6	Q8NH74	314 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	PIFO	Q8TCI5	191 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	OR5M11	Q96RB7	305 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	DDO	Q99489	341 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	POLR2J2	Q9GZM3	115 aa	Known RBP	13.69	□□□□□ -0.22
PKM-223	ENST00000569050	SLC22A4	Q9H015	551 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	POLR2J3	Q9H1A7	115 aa	Known RBP	13.69	□□□□□ -0.22
PKM-223	ENST00000569050	RERGL	Q9H628	205 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	ARL8B	Q9NVJ2	186 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	GID8	Q9NWU2	228 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	GAR1	Q9NY12	217 aa	Known RBP	13.69	□□□□□ -0.22
PKM-223	ENST00000569050	RPS6KA6	Q9UK32	745 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	AURKC	Q9UQB9	309 aa		13.69	□□□□□ -0.22
PKM-223	ENST00000569050	NOP16	Q9Y3C1	178 aa	Known RBP	13.69	□□□□□ -0.22
PKM-223	ENST00000569050	CD300LB	A8K4G0	201 aa		13.68	□□□□□ -0.22
PKM-223	ENST00000569050	XKRY	O14609	159 aa		13.68	□□□□□ -0.22
PKM-223	ENST00000569050	ACOT8	O14734	319 aa		13.68	□□□□□ -0.22
PKM-223	ENST00000569050	GMDS	O60547	372 aa		13.68	□□□□□ -0.22
PKM-223	ENST00000569050	SLC16A7	O60669	478 aa		13.68	□□□□□ -0.22
PKM-223	ENST00000569050	AMY2B	P19961	511 aa		13.68	□□□□□ -0.22
PKM-223	ENST00000569050	MEP1B	Q16820	701 aa		13.68	□□□□□ -0.22
PKM-223	ENST00000569050	CORO6	Q6QEF8	472 aa		13.68	□□□□□ -0.22
PKM-223	ENST00000569050	FAM122B	Q7Z309	247 aa		13.68	□□□□□ -0.22
PKM-223	ENST00000569050	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.68	□□□□□ -0.22
PKM-223	ENST00000569050	NAA40	Q86UY6	237 aa		13.68	□□□□□ -0.22
PKM-223	ENST00000569050	GJC3	Q8NFK1	279 aa		13.68	□□□□□ -0.22
PKM-223	ENST00000569050	CMTM5	Q96DZ9	223 aa		13.68	□□□□□ -0.22
PKM-223	ENST00000569050	SEH1L	Q96EE3	360 aa		13.68	□□□□□ -0.22
PKM-223	ENST00000569050	SYT4	Q9H2B2	425 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms