RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 SDR9C7Q8NEX9 313 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 C8orf46Q8TAG6 207 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 RERGLQ9H628 205 aa9.49□□□□□ -0.89
CLK3-222ENST00000568232 SF3B6Q9Y3B4 125 aaKnown RBP9.49□□□□□ -0.89
CLK3-222ENST00000568232 TRAV27A0A087WT01 109 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 TRBV5-3A0A0A0MS03 114 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 IMPA2O14732 288 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 NDUFB3O43676 98 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 ANGPTL7O43827 346 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 TNFRSF1BP20333 461 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 RBM34P42696 430 aaKnown RBP9.48□□□□□ -0.89
CLK3-222ENST00000568232 BLCAPP62952 87 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 DCTN2Q13561 401 aaKnown RBP9.48□□□□□ -0.89
CLK3-222ENST00000568232 AANATQ16613 207 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 PCK2Q16822 640 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 ARSJQ5FYB0 599 aaPredicted RBP9.48□□□□□ -0.89
CLK3-222ENST00000568232 PGAP1Q75T13 922 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.48□□□□□ -0.89
CLK3-222ENST00000568232 KIRREL3Q8IZU9 778 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 PLPP7Q8NBV4 271 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 OR5T2Q8NGG2 359 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 OR51A7Q8NH64 312 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 ACOT11Q8WXI4 607 aaPredicted RBP9.48□□□□□ -0.89
CLK3-222ENST00000568232 DPF1Q92782 380 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 DMRTB1Q96MA1 342 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 OR52B2Q96RD2 323 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 PRSS22Q9GZN4 317 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 METTL8Q9H825 291 aaKnown RBP9.48□□□□□ -0.89
CLK3-222ENST00000568232 VSX1Q9NZR4 365 aaPredicted RBP9.48□□□□□ -0.89
CLK3-222ENST00000568232 RPS6KA6Q9UK32 745 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 AURKCQ9UQB9 309 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 COA3Q9Y2R0 106 aaPredicted RBP9.48□□□□□ -0.89
CLK3-222ENST00000568232 NDUFAF1Q9Y375 327 aa9.48□□□□□ -0.89
CLK3-222ENST00000568232 TEX13CA0A0J9YWL9 993 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 TCRBV4S1A1TA0A5B7 111 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 TRPC5OSA6NMA1 111 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 CD300LBA8K4G0 201 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.47□□□□□ -0.89
CLK3-222ENST00000568232 UBDO15205 165 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 SYNGR1O43759 233 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 GMDSO60547 372 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 IGF2P01344 180 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 LYL1P12980 280 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 PPIBP23284 216 aaKnown RBP9.47□□□□□ -0.89
CLK3-222ENST00000568232 ANOS1P23352 680 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 TGM4P49221 684 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 LSM6P62312 80 aaKnown RBP9.47□□□□□ -0.89
CLK3-222ENST00000568232 PIN1Q13526 163 aaPredicted RBP9.47□□□□□ -0.89
CLK3-222ENST00000568232 FHL1Q13642 323 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 CNN3Q15417 329 aaKnown RBP9.47□□□□□ -0.89
CLK3-222ENST00000568232 MEP1BQ16820 701 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 MICBQ29980 383 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 MESTQ5EB52 335 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 CORO6Q6QEF8 472 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 SLC36A1Q7Z2H8 476 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 C11orf53Q8IXP5 236 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 DYNAPQ8N1N2 210 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 LINC00482Q8N8I6 264 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 LRRC29Q8WV35 223 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 TFAP2CQ92754 450 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 TAMM41Q96BW9 452 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 Q96M85 177 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 COQ7Q99807 217 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 ATPIF1Q9UII2 106 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 RIMS3Q9UJD0 308 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 MED31Q9Y3C7 131 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 ADAM18Q9Y3Q7 739 aa9.47□□□□□ -0.89
CLK3-222ENST00000568232 LSM4Q9Y4Z0 139 aaKnown RBP9.47□□□□□ -0.89
CLK3-222ENST00000568232 A0A1W2PQ09 198 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 EVPLLA8MZ36 301 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 F5H5K5 113 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 M0R1W7 72 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 SLC16A7O60669 478 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 SASH3O75995 380 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 ZFPL1O95159 310 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 LCATP04180 440 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 ACSM4P0C7M7 580 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 MUC1P15941 1255 aaPredicted RBP9.46□□□□□ -0.9
CLK3-222ENST00000568232 VDAC2P45880 294 aaPredicted RBP9.46□□□□□ -0.9
CLK3-222ENST00000568232 TAS2R41P59536 307 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 HIST1H3AP68431 136 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 MPP2Q14168 576 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 LRRC10Q5BKY1 277 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 HIST2H3PS2Q5TEC6 136 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 HIST2H3AQ71DI3 136 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 MEPCEQ7L2J0 689 aaKnown RBP9.46□□□□□ -0.9
CLK3-222ENST00000568232 MRPL21Q7Z2W9 205 aaKnown RBP9.46□□□□□ -0.9
CLK3-222ENST00000568232 MAVSQ7Z434 540 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 FUNDC1Q8IVP5 155 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 GLB1L2Q8IW92 636 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 C11orf65Q8NCR3 313 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 MYDGFQ969H8 173 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 BPIFA2Q96DR5 249 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 DUS3LQ96G46 650 aaKnown RBP9.46□□□□□ -0.9
CLK3-222ENST00000568232 TCF19Q9Y242 345 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 POLR1DQ9Y2S0 133 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 SH3GLB1Q9Y371 365 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 GMEB1Q9Y692 573 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 LHFPL6Q9Y693 200 aa9.46□□□□□ -0.9
CLK3-222ENST00000568232 PRSS37A4D1T9 235 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms