RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 THEM6Q8WUY1 208 aa11.54□□□□□ -0.56
CLK3-218ENST00000566926 ISOC1Q96CN7 298 aa11.54□□□□□ -0.56
CLK3-218ENST00000566926 OR8B4Q96RC9 309 aa11.54□□□□□ -0.56
CLK3-218ENST00000566926 ZNF416Q9BWM5 594 aa11.54□□□□□ -0.56
CLK3-218ENST00000566926 OR2H1Q9GZK4 316 aa11.54□□□□□ -0.56
CLK3-218ENST00000566926 GNG8Q9UK08 70 aa11.54□□□□□ -0.56
CLK3-218ENST00000566926 COPS3Q9UNS2 423 aa11.54□□□□□ -0.56
CLK3-218ENST00000566926 SETD2Q9BYW2 2564 aaPredicted RBP11.53□□□□□ -0.56
CLK3-218ENST00000566926 RNF223E7ERA6 249 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 H3BSA7 217 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 M0R233 179 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 NDUFS8O00217 210 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 PLPP2O43688 288 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 GPRIN2O60269 458 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 HLA-DPB1P04440 258 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 HEXAP06865 529 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 FAM157BP0CG42 384 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 COX5BP10606 129 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 CCL2P13500 99 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 CCNOP22674 350 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 TGFBR2P37173 567 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 RIDAP52758 137 aaKnown RBP11.53□□□□□ -0.56
CLK3-218ENST00000566926 OR12D2P58182 307 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 ENDOGQ14249 297 aaKnown RBP11.53□□□□□ -0.56
CLK3-218ENST00000566926 KLBQ86Z14 1044 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 MS4A15Q8N5U1 240 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 CPEB3Q8NE35 698 aaKnown RBP11.53□□□□□ -0.56
CLK3-218ENST00000566926 GJC3Q8NFK1 279 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 AKR7LQ8NHP1 331 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 RNF133Q8WVZ7 376 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 THRSPQ92748 146 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 PELI1Q96FA3 418 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 POM121L2Q96KW2 1035 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 SORCS2Q96PQ0 1159 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 ABHD6Q9BV23 337 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 MRPL37Q9BZE1 423 aaKnown RBP11.53□□□□□ -0.56
CLK3-218ENST00000566926 GSX1Q9H4S2 264 aaPredicted RBP11.53□□□□□ -0.56
CLK3-218ENST00000566926 ISG20L2Q9H9L3 353 aaKnown RBP11.53□□□□□ -0.56
CLK3-218ENST00000566926 ELOVL3Q9HB03 270 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 DUSP13Q9UII6 198 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 IKZF2Q9UKS7 526 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 STUB1Q9UNE7 303 aa11.53□□□□□ -0.56
CLK3-218ENST00000566926 HIVEP2P31629 2446 aa11.52□□□□□ -0.56
CLK3-218ENST00000566926 LOC390937A0A1W2PQ73 354 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 C5orf49A4QMS7 147 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 ZNF878C9JN71 531 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 OGG1O15527 345 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 AIREO43918 545 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 SERPINA3P01011 423 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 APOC1P02654 83 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 CELP19835 753 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 GTF2A1P52655 376 aaPredicted RBP11.52□□□□□ -0.57
CLK3-218ENST00000566926 KLF3P57682 345 aaPredicted RBP11.52□□□□□ -0.57
CLK3-218ENST00000566926 ECH1Q13011 328 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 MEP1BQ16820 701 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 TP53I3Q53FA7 332 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 LIPKQ5VXJ0 399 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 FOXB2Q5VYV0 432 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 FDX2Q6P4F2 183 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 SSX6Q7RTT6 188 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 DCXRQ7Z4W1 244 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 KRT77Q7Z794 578 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 PAQR4Q8N4S7 273 aaPredicted RBP11.52□□□□□ -0.57
CLK3-218ENST00000566926 ZNF525Q8N782 197 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 YIPF7Q8N8F6 280 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 SYNPRQ8TBG9 265 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 ST7LQ8TDW4 575 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 SMIM19Q96E16 107 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 WNT5BQ9H1J7 359 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 ACOXLQ9NUZ1 547 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 SLCO1C1Q9NYB5 712 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 ASH2LQ9UBL3 628 aa11.52□□□□□ -0.57
CLK3-218ENST00000566926 MRM2Q9UI43 246 aaKnown RBP11.52□□□□□ -0.57
CLK3-218ENST00000566926 IGHV4-30-2A0A087WSY4 118 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 A0A1W2PPW3 197 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 H3BMQ9 156 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 SGCEO43556 437 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 MPZL1O95297 269 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 LY6G6DO95868 133 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 ABHD16AO95870 558 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 GPANK1O95872 356 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 ZNF250P15622 560 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 TUBG1P23258 451 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 GCH1P30793 250 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 OPRL1P41146 370 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 CCR9P51686 369 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 HCCSP53701 268 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 GRB2P62993 217 aaKnown RBP11.51□□□□□ -0.57
CLK3-218ENST00000566926 DBPQ10586 325 aaPredicted RBP11.51□□□□□ -0.57
CLK3-218ENST00000566926 CDK5R1Q15078 307 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 SSX1Q16384 188 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 CTF1Q16619 201 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 NKPD1Q17RQ9 610 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 ZNF829Q3KNS6 432 aaPredicted RBP11.51□□□□□ -0.57
CLK3-218ENST00000566926 ZNF718Q3SXZ3 478 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 LIPNQ5VXI9 398 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 DMKNQ6E0U4 476 aaPredicted RBP11.51□□□□□ -0.57
CLK3-218ENST00000566926 ZNF774Q6NX45 483 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 SLC16A12Q6ZSM3 486 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms